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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  31000 Functional Connectomes Project114416      
  5CONN : functional connectivity toolbox56279      
  10DSI Studio28998      
  11TOADS-CRUISE Brain Segmentation Tools28794      
  12Multi-Modal MRI Reproducibility Resource27711      
  13IIT Human Brain Atlas (v.4.1)24496      
  15BrainNet Viewer20487      
  17Functional Imaging BIRN17457      
  18PANDA: a pipeline tool for diffusion MRI16932      
  19JIST: Java Image Science Toolkit16711      
  20The Neuro Bureau14932      
  21Generalized PPI Toolbox14501      
  22Solar Eclipse Imaging Genetics tools13044      
  25BrainVisa Morphologist extensions11851      
  26MINC - Medical Image NetCDF11741      
  27MITK Diffusion11412      
  28BioImage Suite11173      
  293D Slicer10404      
  31BrainMap Database9438      
  32Talairach Daemon9067      
  35Neuroimaging Made Easy Blog8456      
  36fNIRS Data Analysis Environment8415      
  38Automatic Registration Toolbox8256      
  39Diffusion Toolkit / TrackVis7967      
  40Subject Order-Independent Group ICA7610      
  41XNAT Extras7223      
  42Artifact Detection Tools (ART)7008      
  43BrainMask Volume Processing Tool6868      
  44NYU CSC TestRetest6773      
  45Spatially Constrained Parcellation6589      
  46Data Format Tools6331      
  48Hammer And WML Modules for 3D Slicer5973      
  50Network-Based Statistic (NBS)5777      
  51Group ICA Toolbox (GIFT and EEGIFT)5763      
  52Computational Morphometry Toolkit (CMTK)5706      
  53UNC 0-1-2 Infant Atlases5663      
  55LONI Pipeline Environment5176      
  57SRI24 Atlas: Normal Adult Brain Anatomy5097      
  58NeuroImaging Analysis Kit (NIAK)5029      
  60Source Information Flow Toolbox4984      
  61BrainVoyager Brain Tutor4885      
  62Center for Functional Neuroimaging Tech4642      
  63Human Imaging Database (HID)4582      
  653T DWI test-retest reliability dataset4352      
  66GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity4272      
  67Vaa3D and Vaa3D-Neuron4200      
  70ABSORB for groupwise registration3977      
  722008 MICCAI MS Lesion Segmentation Challenge3837      
  74MATLAB Tutorial on Diffusion Tensor MRI3752      
  75FBIRN Image Processing Scripts (FIPS)3702      
  76BXH/XCEDE Tools3615      
  77SPHARM-PDM Toolbox3605      
  78CBS High-Res Brain Processing Tools3582      
  79MRI Defacer3573      
  80HAMMER: Deformable Registration3571      
  83DWI/DTI Quality Control Tool: DTIPrep3404      
  84ABC (Atlas Based Classification)3398      
  86Maps4Mipav (Exploratory JIST) 3353      
  87CANDI Neuroimaging Access Point3084      
  88Optseq - fMRI Event Scheduler3076      
  90Task Independent Fluctuations Discussion3022      
  91LONI Debabeler3019      
  92Pipeline system for Octave and Matlab2983      
  93MARS (Multi-Atlas Robust Segmentation)2977      
  95Robust Brain Extraction (ROBEX)2901      
  97NITRC Computational Environment (NITRC-CE)2810      
  98NODDI Matlab Toolbox2801      
  100JIP fMRI Analysis Toolkit2666