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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  31000 Functional Connectomes Project109313      
  5CONN : functional connectivity toolbox51838      
  10TOADS-CRUISE Brain Segmentation Tools28436      
  11DSI Studio28435      
  12Multi-Modal MRI Reproducibility Resource26722      
  13IIT Human Brain Atlas (v.4.1)22709      
  15BrainNet Viewer18419      
  17Functional Imaging BIRN16762      
  18JIST: Java Image Science Toolkit16290      
  19PANDA: a pipeline tool for diffusion MRI15966      
  20The Neuro Bureau14446      
  21Generalized PPI Toolbox13552      
  22Solar Eclipse Imaging Genetics tools12057      
  23MINC - Medical Image NetCDF11515      
  26BrainVisa Morphologist extensions11351      
  27MITK Diffusion10270      
  28BioImage Suite10189      
  293D Slicer10129      
  31BrainMap Database9210      
  32Talairach Daemon8980      
  36Automatic Registration Toolbox8036      
  37Neuroimaging Made Easy Blog8022      
  38Diffusion Toolkit / TrackVis7630      
  39Subject Order-Independent Group ICA7508      
  40fNIRS Data Analysis Environment7400      
  41XNAT Extras6907      
  42BrainMask Volume Processing Tool6717      
  43Artifact Detection Tools (ART)6700      
  44NYU CSC TestRetest6247      
  45Spatially Constrained Parcellation6116      
  46Data Format Tools6078      
  49Hammer And WML Modules for 3D Slicer5762      
  50Group ICA Toolbox (GIFT and EEGIFT)5599      
  51Computational Morphometry Toolkit (CMTK)5400      
  53Network-Based Statistic (NBS)5218      
  54LONI Pipeline Environment5137      
  55UNC 0-1-2 Infant Atlases5120      
  56SRI24 Atlas: Normal Adult Brain Anatomy4920      
  57NeuroImaging Analysis Kit (NIAK)4900      
  58BrainVoyager Brain Tutor4750      
  59Source Information Flow Toolbox4649      
  60Human Imaging Database (HID)4476      
  61Center for Functional Neuroimaging Tech4415      
  65Vaa3D and Vaa3D-Neuron3917      
  66GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity3884      
  67ABSORB for groupwise registration3849      
  69MATLAB Tutorial on Diffusion Tensor MRI3662      
  72FBIRN Image Processing Scripts (FIPS)3615      
  733T DWI test-retest reliability dataset3571      
  74HAMMER: Deformable Registration3489      
  75SPHARM-PDM Toolbox3481      
  76MRI Defacer3421      
  772008 MICCAI MS Lesion Segmentation Challenge3387      
  78BXH/XCEDE Tools3284      
  79ABC (Atlas Based Classification)3279      
  80CBS High-Res Brain Processing Tools3263      
  81Maps4Mipav (Exploratory JIST) 3250      
  84DWI/DTI Quality Control Tool: DTIPrep3110      
  85Optseq - fMRI Event Scheduler2989      
  87CANDI Neuroimaging Access Point2965      
  88Pipeline system for Octave and Matlab2935      
  89Task Independent Fluctuations Discussion2922      
  90LONI Debabeler2915      
  94MARS (Multi-Atlas Robust Segmentation)2771      
  97Robust Brain Extraction (ROBEX)2635      
  98JIP fMRI Analysis Toolkit2581      
  100NODDI Matlab Toolbox2440