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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron507014      
  2ITK-SNAP184347      
  31000 Functional Connectomes Project111763      
  4DTI-TK72307      
  5CONN : functional connectivity toolbox53948      
  6EEGLAB38380      
  7FreeSurfer37098      
  8Nilearn36333      
  9WFU_PickAtlas31795      
  10DSI Studio28717      
  11TOADS-CRUISE Brain Segmentation Tools28592      
  12Multi-Modal MRI Reproducibility Resource27235      
  13IIT Human Brain Atlas (v.4.1)23315      
  14MRIcroGL20839      
  15BrainNet Viewer19296      
  16IBSR17463      
  17Functional Imaging BIRN17113      
  18JIST: Java Image Science Toolkit16575      
  19PANDA: a pipeline tool for diffusion MRI16468      
  20The Neuro Bureau14708      
  21Generalized PPI Toolbox14023      
  22Solar Eclipse Imaging Genetics tools12624      
  23NeuroDebian11742      
  24MINC - Medical Image NetCDF11645      
  25GIFTI11640      
  26BrainVisa Morphologist extensions11625      
  27MITK Diffusion10839      
  28BioImage Suite10641      
  293D Slicer10266      
  30Mango10183      
  31BrainMap Database9298      
  32Talairach Daemon9029      
  33MRtrix8979      
  34fMRI-CPCA8432      
  35BrainVISA8311      
  36Neuroimaging Made Easy Blog8205      
  37Automatic Registration Toolbox8113      
  38fNIRS Data Analysis Environment7853      
  39Diffusion Toolkit / TrackVis7773      
  40Subject Order-Independent Group ICA7553      
  41XNAT Extras7079      
  42Artifact Detection Tools (ART)6848      
  43BrainMask Volume Processing Tool6802      
  44NYU CSC TestRetest6501      
  45Spatially Constrained Parcellation6362      
  46Data Format Tools6236      
  47FSL6021      
  483DSlicerLupusLesionModule5886      
  49Hammer And WML Modules for 3D Slicer5862      
  50Group ICA Toolbox (GIFT and EEGIFT)5667      
  51Computational Morphometry Toolkit (CMTK)5568      
  52Network-Based Statistic (NBS)5496      
  53UNC 0-1-2 Infant Atlases5428      
  54BrainVoyager5400      
  55LONI Pipeline Environment5160      
  56NeuroImaging Analysis Kit (NIAK)4977      
  57SRI24 Atlas: Normal Adult Brain Anatomy4972      
  58BrainVoyager Brain Tutor4815      
  59Source Information Flow Toolbox4785      
  60dcm2nii4733      
  61GRETNA4619      
  62Center for Functional Neuroimaging Tech4547      
  63Human Imaging Database (HID)4526      
  64SPM4302      
  65Vaa3D and Vaa3D-Neuron4097      
  66GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity4054      
  67ABSORB for groupwise registration3908      
  68TumorSim3885      
  693T DWI test-retest reliability dataset3840      
  70BrainSuite3799      
  71NIfTI3735      
  72MATLAB Tutorial on Diffusion Tensor MRI3711      
  73FBIRN Image Processing Scripts (FIPS)3666      
  742008 MICCAI MS Lesion Segmentation Challenge3556      
  75SPHARM-PDM Toolbox3556      
  76HAMMER: Deformable Registration3545      
  77BXH/XCEDE Tools3515      
  78MRI Defacer3506      
  79age-ility3502      
  80CBS High-Res Brain Processing Tools3448      
  81FMRIpower3353      
  82ABC (Atlas Based Classification)3325      
  83Maps4Mipav (Exploratory JIST) 3296      
  84REX3254      
  85DWI/DTI Quality Control Tool: DTIPrep3240      
  86Homer23038      
  87Optseq - fMRI Event Scheduler3026      
  88CANDI Neuroimaging Access Point3018      
  89Task Independent Fluctuations Discussion2993      
  90Pipeline system for Octave and Matlab2969      
  91LONI Debabeler2953      
  92DicomBrowser2924      
  93MARS (Multi-Atlas Robust Segmentation)2867      
  94GLIRT2825      
  95iBEAT2802      
  96Robust Brain Extraction (ROBEX)2770      
  97Licensing2707      
  98NODDI Matlab Toolbox2613      
  99JIP fMRI Analysis Toolkit2609      
  100NITRC Computational Environment (NITRC-CE)2567