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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  1MRIcron506938      
  2ITK-SNAP184264      
  31000 Functional Connectomes Project111751      
  4DTI-TK72307      
  5CONN : functional connectivity toolbox53929      
  6EEGLAB38380      
  7FreeSurfer37098      
  8Nilearn36315      
  9WFU_PickAtlas31793      
  10DSI Studio28710      
  11TOADS-CRUISE Brain Segmentation Tools28590      
  12Multi-Modal MRI Reproducibility Resource27232      
  13IIT Human Brain Atlas (v.4.1)23317      
  14MRIcroGL20817      
  15BrainNet Viewer19287      
  16IBSR17458      
  17Functional Imaging BIRN17114      
  18JIST: Java Image Science Toolkit16573      
  19PANDA: a pipeline tool for diffusion MRI16467      
  20The Neuro Bureau14706      
  21Generalized PPI Toolbox14022      
  22Solar Eclipse Imaging Genetics tools12619      
  23NeuroDebian11737      
  24MINC - Medical Image NetCDF11643      
  25GIFTI11637      
  26BrainVisa Morphologist extensions11623      
  27MITK Diffusion10841      
  28BioImage Suite10640      
  293D Slicer10266      
  30Mango10180      
  31BrainMap Database9296      
  32Talairach Daemon9029      
  33MRtrix8979      
  34fMRI-CPCA8433      
  35BrainVISA8309      
  36Neuroimaging Made Easy Blog8200      
  37Automatic Registration Toolbox8113      
  38fNIRS Data Analysis Environment7848      
  39Diffusion Toolkit / TrackVis7770      
  40Subject Order-Independent Group ICA7553      
  41XNAT Extras7079      
  42Artifact Detection Tools (ART)6846      
  43BrainMask Volume Processing Tool6805      
  44NYU CSC TestRetest6500      
  45Spatially Constrained Parcellation6361      
  46Data Format Tools6235      
  47FSL6021      
  483DSlicerLupusLesionModule5888      
  49Hammer And WML Modules for 3D Slicer5860      
  50Group ICA Toolbox (GIFT and EEGIFT)5665      
  51Computational Morphometry Toolkit (CMTK)5567      
  52Network-Based Statistic (NBS)5494      
  53UNC 0-1-2 Infant Atlases5426      
  54BrainVoyager5400      
  55LONI Pipeline Environment5160      
  56NeuroImaging Analysis Kit (NIAK)4976      
  57SRI24 Atlas: Normal Adult Brain Anatomy4972      
  58BrainVoyager Brain Tutor4815      
  59Source Information Flow Toolbox4785      
  60dcm2nii4731      
  61GRETNA4618      
  62Center for Functional Neuroimaging Tech4541      
  63Human Imaging Database (HID)4526      
  64SPM4299      
  65Vaa3D and Vaa3D-Neuron4096      
  66GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity4052      
  67ABSORB for groupwise registration3910      
  68TumorSim3885      
  693T DWI test-retest reliability dataset3840      
  70BrainSuite3799      
  71NIfTI3735      
  72MATLAB Tutorial on Diffusion Tensor MRI3710      
  73FBIRN Image Processing Scripts (FIPS)3666      
  74SPHARM-PDM Toolbox3556      
  752008 MICCAI MS Lesion Segmentation Challenge3553      
  76HAMMER: Deformable Registration3545      
  77BXH/XCEDE Tools3513      
  78MRI Defacer3506      
  79age-ility3502      
  80CBS High-Res Brain Processing Tools3448      
  81FMRIpower3352      
  82ABC (Atlas Based Classification)3325      
  83Maps4Mipav (Exploratory JIST) 3296      
  84REX3254      
  85DWI/DTI Quality Control Tool: DTIPrep3237      
  86Homer23035      
  87Optseq - fMRI Event Scheduler3026      
  88CANDI Neuroimaging Access Point3019      
  89Task Independent Fluctuations Discussion2993      
  90Pipeline system for Octave and Matlab2969      
  91LONI Debabeler2953      
  92DicomBrowser2924      
  93MARS (Multi-Atlas Robust Segmentation)2866      
  94GLIRT2826      
  95iBEAT2802      
  96Robust Brain Extraction (ROBEX)2770      
  97Licensing2706      
  98NODDI Matlab Toolbox2612      
  99JIP fMRI Analysis Toolkit2608      
  100NITRC Computational Environment (NITRC-CE)2567