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Below is a list of the tools and resources that have had files downloaded directly through NITRC. They are ranked in order starting with the tool/resource with file releases that have been downloaded the most.

You may click on the tool/resource name to get to the Summary page for that tool/resource.

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Rank Tool/Resource name Downloads
  31000 Functional Connectomes Project106797      
  5CONN : functional connectivity toolbox49464      
  10TOADS-CRUISE Brain Segmentation Tools28280      
  11DSI Studio28205      
  12Multi-Modal MRI Reproducibility Resource26176      
  13IIT Human Brain Atlas (v.4.1)21982      
  14BrainNet Viewer17437      
  16Functional Imaging BIRN16471      
  18JIST: Java Image Science Toolkit16099      
  19PANDA: a pipeline tool for diffusion MRI15507      
  20The Neuro Bureau14195      
  21Generalized PPI Toolbox13150      
  22Solar Eclipse Imaging Genetics tools11374      
  23MINC - Medical Image NetCDF11342      
  25BrainVisa Morphologist extensions11027      
  273D Slicer9960      
  29MITK Diffusion9603      
  30BioImage Suite9537      
  31BrainMap Database9071      
  32Talairach Daemon8935      
  35Automatic Registration Toolbox7957      
  37Neuroimaging Made Easy Blog7797      
  38Diffusion Toolkit / TrackVis7488      
  39Subject Order-Independent Group ICA7450      
  40fNIRS Data Analysis Environment6761      
  41XNAT Extras6651      
  42BrainMask Volume Processing Tool6595      
  43Artifact Detection Tools (ART)6578      
  44NYU CSC TestRetest6012      
  45Data Format Tools5934      
  46Spatially Constrained Parcellation5869      
  49Hammer And WML Modules for 3D Slicer5676      
  50Group ICA Toolbox (GIFT and EEGIFT)5528      
  52Computational Morphometry Toolkit (CMTK)5274      
  53LONI Pipeline Environment5078      
  54Network-Based Statistic (NBS)4983      
  55UNC 0-1-2 Infant Atlases4878      
  56NeuroImaging Analysis Kit (NIAK)4833      
  57SRI24 Atlas: Normal Adult Brain Anatomy4831      
  58BrainVoyager Brain Tutor4677      
  59Source Information Flow Toolbox4438      
  60Human Imaging Database (HID)4401      
  61Center for Functional Neuroimaging Tech4278      
  65ABSORB for groupwise registration3782      
  66GraphVar: A user-friendly toolbox for comprehensive graph analyses of functional brain connectivity3710      
  68MATLAB Tutorial on Diffusion Tensor MRI3611      
  69Vaa3D and Vaa3D-Neuron3609      
  70FBIRN Image Processing Scripts (FIPS)3580      
  73SPHARM-PDM Toolbox3444      
  74HAMMER: Deformable Registration3419      
  75MRI Defacer3333      
  762008 MICCAI MS Lesion Segmentation Challenge3253      
  77ABC (Atlas Based Classification)3232      
  783T DWI test-retest reliability dataset3212      
  79Maps4Mipav (Exploratory JIST) 3186      
  80BXH/XCEDE Tools3139      
  82CBS High-Res Brain Processing Tools3069      
  84DWI/DTI Quality Control Tool: DTIPrep2973      
  85Optseq - fMRI Event Scheduler2930      
  86CANDI Neuroimaging Access Point2899      
  87Pipeline system for Octave and Matlab2894      
  88Task Independent Fluctuations Discussion2869      
  89LONI Debabeler2828      
  93MARS (Multi-Atlas Robust Segmentation)2637      
  96JIP fMRI Analysis Toolkit2544      
  98Robust Brain Extraction (ROBEX)2495