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  1. Atlas Application (40)
  2. Connectivity Analysis (28)
  3. Database Application (22)
  4. Experimental Control (8)
  5. Format Conversion (18)
  6. Genomic Analysis (16) »
    1. » Next Generation Sequencing (2)
    2. » Other Omics (1)
    3. » Pathways & Networks (1)
    4. » SNP's & Genes (14)
  7. Image Reconstruction (14) »
    1. » Tomography (1)
  8. Information Theory (4)
  9. Modeling (75) »
    1. » Finite Element Analysis (2)
    2. » Forward - Inverse (19)
    3.    » EEG Modeling (13)
    4.    » MEG Modeling (12)
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    11.    » Diffusion Spectrum (4)
    12.    » Q-Ball (4)
    13. » Tensor Metric (16)
    14.    » Direction (1)
  10. Neuronal Characterization (1)
  11. Quantification (55) »
    1. » Morphology (10)
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    3.    » DICE Coefficient (1)
    4.    » Tanomoto Coefficient (1)
    5. » Position (4)
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    7. » Stereology (1)
    8. » Volumetric Analysis (22)
    9.    » Center of Mass (1)
    10.    » Volume Measurement (8)
  12. Segmentation (70) »
    1. » Active Contour (4)
    2. » Expectation Minimization (3)
    3. » Intensity Contour (2)
    4. » KMeans (1)
    5. » Manual (5)
    6. » Neural Network (1)
    7. » Quality Metrics (4)
    8. » Region Growing (5)
    9.    » Constrained Region Growing (2)
    10. » Region of Interest (18)
    11.    » Labeling (10)
    12. » Volumetric Analysis (14)
  13. Shape Analysis (20) »
    1. » Medial Axis (1)
    2. » Shape Decomposition (4)
    3.    » Spherical Harmonics (4)
  14. Spatial Transformation (63) »
    1. » Artifact Removal (13)
    2. » Colocalization (1)
    3. » Frequency Domain (7)
    4.    » Filtering (4)
    5.    » Fourier Transform (2)
    6. » Intensity Operations (4)
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    8. » Quality Metrics (8)
    9. » Registration (38)
    10.    » Fiducial (1)
    11.    » Image-to-Image (19)
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    13. » Resampling (20)
    14.    » Sinc Function Interpolation (1)
    15.    » Spline Interpolation (3)
    16.    » Tri-linear (1)
    17. » Spatial Convolution - Deconvolution (3)
    18. » Warping (16)
    19.    » Affine Warp (5)
    20.    » Linear Warp (1)
    21.    » Nonlinear Warp (6)
    22. » Wavelet Transformation (2)
  15. Statistical Operation (72) »
    1. » Discriminant Analysis (4)
    2. » Independent Component Analysis (17)
    3. » Multivariate Analysis (14)
    4. » Principal Component Analysis (14)
    5. » Regression (23)
    6.    » Linear (15)
    7.    » Nonlinear (3)
  16. Surface Analysis (23) »
    1. » Curvature (4)
    2.    » Gaussian Curvature (3)
    3.    » Mean Curvature (4)
    4. » Thickness (7)
  17. Temporal Transformation (33) »
    1. » Fourier Time-domain Analysis (9)
    2. » Motion Analysis (5)
    3. » Spectral Analysis (14)
    4. » Temporal Convolution - Deconvolution (2)
    5. » Temporal Curve Fitting (3)
    6.    » Haemodynamic Response (3)
    7. » Temporal Integration (1)
    8. » Temporal Wavelet Analysis (3)
  18. Time Domain Analysis (34) »
    1. » ANOVA (2)
    2. » Correlation (5)
    3.    » Autocorrelation (1)
    4.    » Cross-correlation (2)
  19. Tractography (45) »
    1. » Fiber Tracking (27)
    2.    » Diffusion MR Fiber Tracking (21)
  20. Visualization (115) »
    1. » Animation (11)
    2. » Image Display (55)
    3.    » Clipping (5)
    4.    » Three Dimensional Display (28)
    5.    » Two Dimensional Display (23)
    6. » Rendering (42)
    7.    » Surface Rendering (31)
    8.    » Volume Rendering (16)
  21. Workflow (43)

Examples:
  • • modeling OR simulation
  • • morphology AND animation
  • • segmentation NOT Linux
  • • "region of interest"

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Latest News

[NITRC Community • Aug 14 • no comments]

We heard you: NITRC-IR and NITRC-CE have dedicated spaces!

NITRC's Enhanced Services which comprised of the NITRC Image Repository data commons, and NITRC Computational Environment virtual environment, have become sufficiently data intensive that our focus groups suggested dedicated space for collaboration from...

[The Grid Code Analysis Toolbox (GridCAT) • Jul 21 • no comments]

GridCAT publication

More information about the GridCAT and a demonstration of its key features, together with a detailed review of grid code analysis methods, can now be found in the following publication: Stangl, M.*, Shine, J.*, & Wolbers, T. (2017). The GridCAT:...

[MITK Diffusion • Jul 17 • no comments]

Release announcement: MITK Diffusion 2017.07

Dear users, we have released a new version of the MITK Diffusion application. The full release notes and further information about the application can be found here: http://www.mitk.org/DiffusionImaging As always, we are happy about feedback! -...

[SPHARM-PDM Toolbox • Jul 3 • no comments]

SPHARM-PDM Update

Dear SPHARM-PDM users: I am very glad to announce we have updated the SPHARM-PDM Slicer extension. The new tutorial for this new and improved version can be found here: https://github.com/bpaniagua/SPHARM-PDM/... SPHARM-PDM...

[CONN : functional connectivity toolbox • Jun 27 • no comments]

New CONN release and tutorials

We are happy to announce the latest release of CONN (17f). If you have not had the chance to update CONN recently this is a great time to do so and see what is all the fuzz about the new Quality Assurance plots and measures, increasing BIDS-compatibility...

[NITRC Community • Jun 25 • no comments]

Join NITRC in Booth 18 at OHBM and for poster 1665

Please swing by the NITRC Booth #18 at OHBM from June 25-29, 2017 and let us know how things are going! We will also be presenting Poster #1665 Tuesday, June 27, 2017: 12:45 PM-2:45 PM https://ww5.aievolution.com/hbm1701/inde...

[NITRC Community • Jun 22 • no comments]

Join NITRC at OHBM Hackathon June 22-24, 2017

NITRC will have a project at the OHBM 2017 Hackathon in Vancouver, CANADA. Check out the OHBM Hackathon wiki list of projects here: https://github.com/ohbm/hackathon2017/wi...

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