physio-support > GE Physio Data processing
Jul 16, 2018  07:07 PM | Anant Shinde
GE Physio Data processing
Hi
I have recorded Cardiac and Respiratory dataon GE 3T scanner.
Files I get from scanner are:
Filename                                                                                             No_Datapoints
PPGData_epiRT_0703201816_24_42_498                               148419
PPGTrig_epiRT_0703201816_24_42_498                                 1411
RESPData_epiRT_0703201816_24_42_498                             37105
RESPTrig_epiRT_0703201816_24_42_498                               385

Q1:
I tried to run the GE batch file example with the Data files. I changed TR, Number of slices, total volumes. I was not sure what 'Nslicesperbeat' meant , i left field empty.
Here is the output error.
------------------------------------------------------------------------
Running job #1
------------------------------------------------------------------------
Running 'TAPAS PhysIO Toolbox'
No scan trigger events provided
No cardiac R-peak (heartbeat) events provided
Failed 'TAPAS PhysIO Toolbox'
Error using plot
Vectors must be the same length.
In file "/usr/local/spm12/toolbox/PhysIO/tapas_physio_plot_raw_physdata.m" (???), function "tapas_physio_plot_raw_physdata" at line 75.
In file "/usr/local/spm12/toolbox/PhysIO/tapas_physio_main_create_regressors.m" (???), function "tapas_physio_main_create_regressors" at line 127.
In file "/usr/local/spm12/toolbox/PhysIO/tapas_physio_cfg_matlabbatch.m" (???), function "run_physio" at line 1467.

The following modules did not run:
Failed: TAPAS PhysIO Toolbox

Q2. How to use these Trigger info files?

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TitleAuthorDate
GE Physio Data processing
Anant Shinde Jul 16, 2018
Lars Kasper Sep 22, 2018