general > Using a Custom Atlas in QuickNII
Apr 30, 2025  01:04 PM | Lindsey Ching
Using a Custom Atlas in QuickNII

Hello, I'm interested in using a custom atlas in QuickNII. I ran the script from https://github.com/HumanBrainProject/Qui... (found at the bottom of https://www.nitrc.org/plugins/mwiki/inde...) to create my own .cutlas file.


Where should I place this file so that it I can load it in QuickNII? I've tried placing it in ~/QuickNII-ABAMouse-v3-2017.app/Contents/Resources, since I saw ABA_Mouse_CCFv3_2017_25um.cutlas in this directory, but it's not showing up in the drop-down atlas menu.


Any help would be appreciated!

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TitleAuthorDate
Using a Custom Atlas in QuickNII
Lindsey Ching Apr 30, 2025
Janine Reinert Nov 10, 2025
Gergely Csucs Nov 11, 2025
Janine Reinert Nov 12, 2025
Gergely Csucs Nov 12, 2025
Janine Reinert Nov 23, 2025
Gergely Csucs Nov 24, 2025
Gergely Csucs Apr 30, 2025
Lindsey Ching Apr 30, 2025
Gergely Csucs May 16, 2025