sdm-help-list > can't get past preprocessing
Showing 1-5 of 5 posts
Nov 4, 2016 03:11 PM | Aisling O'Neill
can't get past preprocessing
Hi,
I've reached the preprocessing stage, however the current processing status symbol immediately turns yellow and remains that way, saying:
Launching Preprocessing...
Launched: sdm pp gray matter, 1, 20, gray matter, 1
The SDM table appears to be fine, but the meta-analysis folder isn't reading the .txt study files in my working folder - nothing shows up in it. I reinstalled an older version of SDM and all the files appeared, however, can't use the older version as it now crashes when I try to define the table. Any ideas?
Thanks,
Aisling
I've reached the preprocessing stage, however the current processing status symbol immediately turns yellow and remains that way, saying:
Launching Preprocessing...
Launched: sdm pp gray matter, 1, 20, gray matter, 1
The SDM table appears to be fine, but the meta-analysis folder isn't reading the .txt study files in my working folder - nothing shows up in it. I reinstalled an older version of SDM and all the files appeared, however, can't use the older version as it now crashes when I try to define the table. Any ideas?
Thanks,
Aisling
Nov 4, 2016 03:11 PM | Anton Albajes-Eizagirre - FIDMAG - Germanes Hospitalaries
RE: can't get past preprocessing
Hi Aisling,
What does the execution log (menubar Tools -> View Execution Log) says?
Best,
ant
What does the execution log (menubar Tools -> View Execution Log) says?
Best,
ant
Nov 4, 2016 04:11 PM | Aisling O'Neill
RE: can't get past preprocessing
Hi Ant,
Execution log says:
About to execute: s_exec: "\\kclad.ds.kcl.ac.uk\anywhere\UserData\RGStore04\k1505929\Desktop\SdmGui-win64\bin\windows64/sdm_core" pp_end 1,gray_matter,1.000000,20.000000,gray_matter
Execution log says:
About to execute: s_exec: "\\kclad.ds.kcl.ac.uk\anywhere\UserData\RGStore04\k1505929\Desktop\SdmGui-win64\bin\windows64/sdm_core" pp_end 1,gray_matter,1.000000,20.000000,gray_matter
Nov 5, 2016 05:11 PM | Anton Albajes-Eizagirre - FIDMAG - Germanes Hospitalaries
RE: can't get past preprocessing
Hi Aisling,
It looks like you're running SDM from a network drive (\\kclad.ds.kcl.ac.uk\anywhere). Can you try running SDM from a local drive (ie. c:)? Also you may need to have the data in a local drive.
Let me know if this helps, best,
Anton
It looks like you're running SDM from a network drive (\\kclad.ds.kcl.ac.uk\anywhere). Can you try running SDM from a local drive (ie. c:)? Also you may need to have the data in a local drive.
Let me know if this helps, best,
Anton
Nov 7, 2016 12:11 PM | Aisling O'Neill
RE: can't get past preprocessing
Hi Anton, that worked perfectly! Thanks
