Anima scripts v1.0 releasedPosted By: Olivier Commowick - Sep 10, 2018
Tool/Resource: Anima scripts
We are happy to announce the initial release of Anima scripts, a set of scripts that use Anima to perform complex preprocessing and core processing tasks on medical images. This repository is multi-platform for most scripts (as long as python is available for your system), except for atlasing scripts that require Linux and an OAR scheduler.
This initial release contains the following scripts:
- Atlas-based brain extraction
- Atlas creation from anatomical or DTI images
- Diffusion images pre-processing and multi-compartment models estimation