open-discussion > avg152
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Feb 25, 2008 08:02 PM | farhana Afrin
avg152
What does standard image avg152 mean??If I have mri image,can I
convert it to avg152 with FSL?How??
Feb 25, 2008 08:02 PM | farhana Afrin
RE: avg152
What does standard image avg152 mean??If I have mri image,can I
convert it to
avg152 with FSL?How??
avg152 with FSL?How??
Mar 3, 2008 09:03 AM | Ged Ridgway
RE: avg152
Hi Farhana,
FSL's avg152 is an average of 152 subjects' MR images, aligned to a standard space (similar, but not the same as the Talairach space). This standard template was created by the ICBM and MNI. There is much more information here:
http://imaging.mrc-cbu.cam.ac.uk/imaging...
If by "converting" to avg152 you mean aligning your MR image to this standard space template, then yes, you may use FSL's flirt (type the name at the command line for help, or try Flirt with a capital F, or flirt_gui, to see a graphical user interface) to register your image to the template (reference). For more information on flirt:
http://www.fmrib.ox.ac.uk/fsl/flirt/inde...
I hope that helps,
Ged
FSL's avg152 is an average of 152 subjects' MR images, aligned to a standard space (similar, but not the same as the Talairach space). This standard template was created by the ICBM and MNI. There is much more information here:
http://imaging.mrc-cbu.cam.ac.uk/imaging...
If by "converting" to avg152 you mean aligning your MR image to this standard space template, then yes, you may use FSL's flirt (type the name at the command line for help, or try Flirt with a capital F, or flirt_gui, to see a graphical user interface) to register your image to the template (reference). For more information on flirt:
http://www.fmrib.ox.ac.uk/fsl/flirt/inde...
I hope that helps,
Ged