open-discussion > RE: Remove nonrelevent structures fromCardiac MRI
Jan 3, 2017  01:01 PM | Abdalla Z Mohamed - Thompson Institute, University of the Sunshine Coast
RE: Remove nonrelevent structures fromCardiac MRI
Hello Ines, 
you could use bet which is part of the FSL package and it will help you to extract the heart but it wouldn't be so accurate so you will need to play around with the threshold to get the best extraction 
the second method could be using ITKSNAP package which could give you a better image with better mask. 
Again you might need to edit the mask after both methods to get the best extraction 
Good luck 
Abdalla

Threaded View

TitleAuthorDate
ines ines Jan 1, 2017
RE: Remove nonrelevent structures fromCardiac MRI
Abdalla Z Mohamed Jan 3, 2017
mehrnaz jenabi Jan 2, 2017