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open-discussion > Help creating a heatmap of multiple stroke patients
May 27, 2020 05:05 PM | Manuel Anaya
Help creating a heatmap of multiple stroke patients
Hi everyone,
I am trying to make a lesion heat map from a group of patients. I have the individual lesion maps of the patients and I would like to create a heat map which will show which region on the brain has most overlap among the lesions, with the color bar indicating number of patient overlap according to the color. I tried using the MRIcroGL menu item Draw/Advanced/CreateOverlapImage. It created a single .nii file with lesions of all patients, however when I try visualizing it in MRIcroGL it appears as if it was one patient. Meaning the color bar goes from 0 to 1 only and all the lesions have a single color, although the sample is 24 patients.
How can I correct this? I appreciate your help with this!
Many thanks in advance!!
I am trying to make a lesion heat map from a group of patients. I have the individual lesion maps of the patients and I would like to create a heat map which will show which region on the brain has most overlap among the lesions, with the color bar indicating number of patient overlap according to the color. I tried using the MRIcroGL menu item Draw/Advanced/CreateOverlapImage. It created a single .nii file with lesions of all patients, however when I try visualizing it in MRIcroGL it appears as if it was one patient. Meaning the color bar goes from 0 to 1 only and all the lesions have a single color, although the sample is 24 patients.
How can I correct this? I appreciate your help with this!
Many thanks in advance!!
Threaded View
Title | Author | Date |
---|---|---|
Manuel Anaya | May 27, 2020 | |
Chris Rorden | May 27, 2020 | |
Manuel Anaya | May 27, 2020 | |