help > setup
Sep 26, 2024  10:09 PM | Marc Lalancette - Montreal Neurological Institute
setup

Hi,


First, thanks for this great tool.  I had been dreaming of exactly this method for years!  We're now using it in OMEGA, on over 600 participants in a new release that should come out within a few days.


While another student has been using it successfully for a few months, I'm now trying to set it up and integrate it in our Matlab processing scripts.  However, I'm confused as to how the niftyreg libraries are supposed to be on the library path when in run_mri_reface.sh you reset LD_LIBRARY_PATH.  Where am I supposed to add niftyreg's library path so it's found?


Cheers,


Marc

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setup
Marc Lalancette Sep 26, 2024
Marc Lalancette Sep 26, 2024