questions > RE: dcm2niix: Error converting 4d slices to nifti
Apr 3, 2025  01:04 PM | zubiop1
RE: dcm2niix: Error converting 4d slices to nifti

Thank you for your response, but I don't think I have mosaic images. My situation is different and specifically involves 4D flow MRI data:



  1. I have 60 separate DICOM files from a Siemens scanner (XA60)
  2. Each file represents a different slice position (so 60 different slice positions)
  3. Each file contains all the timeframes for its specific slice position (4D flow acquisition)

What I'm trying to do is merge these 60 files into a single 4D volume where:



  • The first 3 dimensions are spatial (x, y, 60 slices)

  • The 4th dimension is temporal (all timeframes)


When I run dcm2niix, it finds the 60 files but doesn't seem to complete the conversion process. 

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TitleAuthorDate
zubiop1 Apr 3, 2025
Chris Rorden Apr 3, 2025
RE: dcm2niix: Error converting 4d slices to nifti
zubiop1 Apr 3, 2025
Chris Rorden Apr 3, 2025