open-discussion > errors in conn step4 , need help,thank you !
Dec 4, 2011  12:12 PM | yan hongjie
errors in conn step4 , need help,thank you !

Dear export,[/b]

i am very happy to write to you.[/b] [/b]I am a new conn learner, and also a green hand of FMRI data analysis.[/b] [/b]After i read the menu , i got puzzled several times,[/b] [/b]there exist errors and warn[/b]in[/b]gs much time.[/b] [/b]Because i have no structural images, so i do not know which choices and blanks or values i should leave it as default.[/b] .[/b]Can you give me some suggestions?[/b]

And this time i tried,[/b] [/b]and made a little success that i finish the first 3 steps by the men[/b]u[/b] , mine is conn V1.0.This error is coming from the illustration of the 4th step as follows,[/b]

spm
Initialising parameters : ...done
Output images : ...initialised
Plane 46/46 , block 1/1 : ...done
Spatial non-sphericity (over scans) : ...writing resels/voxel image??? NaN's cannot be converted to logicals.

Error in> spm est_smoothness at 260
FWHM(~FWHM) = 1;

Error in> spm_spm at 909
[FWHM,VRpv,R] = spm_est_smoothness(VResI,VM,[nScan erdf]);

Error in > conn_process at 1431
SPM=spm_spm(SPM);

Error in> conn_process at 19
case 'results_voxel', [varargout{1:nargout}]=conn_process(14,varargin{:});

Error in> conn at 1586
conn_process('results_voxel','readsingle');

Error in > conn_menumanager at 112
feval(MM.MENU{n0}.callback{n1}{1},MM.MENU{n0}.callback{n1}{2:end}); 
 Error while evaluating figure WindowButtonUpFcn
 SPM8: spm_spm (v3960) 21:11:46 - 28/11/2011
Error: Unexpected MATLAB expression.

and the other is :

Step 1/2: Functional data second-level analyses
50.6%
 ?  Reference  to non-existent field 'csources'.

Error in > conn_process at 1465
csources=SPMall(n1).connvols.csources;

Error in > conn_process at 18
case 'results', conn_process(14:15,varargin{:});

Error in > conn at 1601
conn_process('results');

Error in > conn_menumanager at 112
feval(MM.MENU{n0}.callback{n1}{1},MM.MENU{n0}.callback{n1}{2:end});
Error while evaluating figure WindowButtonUpFcn

the last one is :[/b]

In an assignment A(I) = B, the number of elements in B and
I must be the same.

Error in > conn at 1554
t1(CONN_h.menus.m_results.y.idx)=S1;
 Error while evaluating uicontrol Callback

that is all.[/b]

By the way ,the examples are 2 groups comparison, but i tried 3 grups i want to compare each 2 of them,and i tried the way selected the 2 i wanted, but none of the time successed.so i do not know why? and i only have one condition.[/b]

Are there any difference between fixed effects and random effects?[/b]

Thank you very much for reading the mail.Waiting for your reply.[/b]

i really find headache and every time repeat errors but can not reach the successful bank , really sad and need guidence. Thanks again.Best wishes .[/b]

Yours sincerely,[/b]

Morgan[/b]

 

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TitleAuthorDate
errors in conn step4 , need help,thank you !
yan hongjie Dec 4, 2011
Michael King Nov 11, 2013
Christine Zakrzewski Dec 4, 2011