help > run_pestica.sh deletes irfretroicor+orig
Nov 26, 2012  11:11 PM | Isaac Schwabacher
run_pestica.sh deletes irfretroicor+orig
Hi all,

I recently downloaded the latest version of PESTICA (v1.3 for AFNI users) and it has been giving me trouble.  Eventually I tracked the problem down to the fact that line 302 of run_pestica.sh deletes the dataset irfretroicor+orig.*, on which irf_retroicor.m has labored for the past few hours.  I thought others might want to know about this.  Also, the same thing appears at line 265 immediately after a call to matlab_retroicor.m, although in that case it's again irfretroicor+orig.* that's getting deleted and not the dataset that's just been created.

I've also noticed that my output IRFs don't really look like the ones in the tutorial, although they seem reasonably consistent across the few subjects I've gotten through the pipeline.  I've attached an example plot, though I suspect that if there is a problem, this won't be enough information to diagnose it.  Is this plot out of the ordinary?

Thanks,
Isaac Schwabacher
Attachment: pestica_qa_irf.jpg

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TitleAuthorDate
run_pestica.sh deletes irfretroicor+orig
Isaac Schwabacher Nov 26, 2012
Erik Beall Nov 28, 2012
Erik Beall Nov 28, 2012
Isaac Schwabacher Nov 28, 2012
Erik Beall Nov 30, 2012