NITRC: ASHS: Automatic Segmentation of Hippocampal Subfields: File Release Notes and Changelog

Notes:
Release Name: rev97

Notes:
Changes:
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r97 | yushkevich | 2013-07-24 11:08:25 -0400 (Wed, 24 Jul 2013) | 1 line

Added a much faster version of bl exec, modified the script to more accurately control the number of samples in bl, making memory management easier. Improved the population of the final directories in ashs_main.
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r96 | yushkevich | 2013-07-17 06:13:25 -0400 (Wed, 17 Jul 2013) | 1 line
Added extra qsub options for bl
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r95 | yushkevich | 2013-05-14 10:03:17 -0400 (Tue, 14 May 2013) | 1 line
Some bug fixes and minor changes after working with Shannon at VA
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r94 | yushkevich | 2013-04-24 14:21:56 -0400 (Wed, 24 Apr 2013) | 1 line
bug fixes while supporting VACIND
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r93 | yushkevich | 2012-10-01 16:35:43 -0400 (Mon, 01 Oct 2012) | 1 line
bootstrapping changes
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r92 | yushkevich | 2012-10-01 16:33:19 -0400 (Mon, 01 Oct 2012) | 1 line
bootstrapping changes
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r91 | yushkevich | 2012-08-28 16:44:14 -0400 (Tue, 28 Aug 2012) | 1 line
Fixed problem with NaN in Mx
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r90 | yushkevich | 2012-05-25 13:52:05 -0400 (Fri, 25 May 2012) | 1 line
Changed how cross-validation is done
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r89 | yushkevich | 2012-05-24 13:48:15 -0400 (Thu, 24 May 2012) | 1 line
Had to fix lots of bugs to get things working. Going to try to add bootstrap to atlas building
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r88 | yushkevich | 2012-05-17 06:10:35 -0400 (Thu, 17 May 2012) | 1 line
Fixed, introduced and refixed bugs, mostly related to QSUB handling
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r87 | yushkevich | 2012-04-25 13:06:57 -0400 (Wed, 25 Apr 2012) | 1 line
fix bug from last change
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r86 | yushkevich | 2012-04-24 13:23:00 -0400 (Tue, 24 Apr 2012) | 1 line
fixed some issues with relative path names
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r85 | yushkevich | 2012-04-24 11:46:22 -0400 (Tue, 24 Apr 2012) | 1 line
set props in this directory
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r84 | yushkevich | 2012-04-24 11:39:15 -0400 (Tue, 24 Apr 2012) | 1 line
Added a testing module
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r83 | yushkevich | 2012-04-23 13:40:07 -0400 (Mon, 23 Apr 2012) | 1 line
added utility script for PDF generation
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r82 | yushkevich | 2012-04-20 10:38:23 -0400 (Fri, 20 Apr 2012) | 1 line
Prefixed all exported variables with ASHS_ and made each qsub script construct its own PATH
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r81 | yushkevich | 2012-04-20 10:34:50 -0400 (Fri, 20 Apr 2012) | 1 line
Prefixed all exported variables with ASHS_ and made each qsub script construct its own PATH
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r80 | yushkevich | 2012-04-08 09:19:39 -0400 (Sun, 08 Apr 2012) | 1 line
Removed qsub requirement
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r79 | yushkevich | 2012-04-06 11:12:25 -0400 (Fri, 06 Apr 2012) | 1 line
Copyright
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r78 | yushkevich | 2012-04-06 08:16:18 -0400 (Fri, 06 Apr 2012) | 1 line
set keywords
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r77 | yushkevich | 2012-04-06 08:05:14 -0400 (Fri, 06 Apr 2012) | 1 line
added copyright header to scripts
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r76 | yushkevich | 2012-03-29 09:07:05 -0400 (Thu, 29 Mar 2012) | 1 line
bug fix
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r75 | yushkevich | 2012-03-28 14:49:32 -0400 (Wed, 28 Mar 2012) | 1 line
bug fix
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r74 | yushkevich | 2012-03-28 14:43:50 -0400 (Wed, 28 Mar 2012) | 1 line
bug fix
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r73 | yushkevich | 2012-03-14 14:32:01 -0400 (Wed, 14 Mar 2012) | 1 line
clean up bin dir
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r72 | yushkevich | 2012-03-14 14:30:28 -0400 (Wed, 14 Mar 2012) | 1 line
cleaned up ants dir
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r71 | yushkevich | 2012-03-14 13:34:46 -0400 (Wed, 14 Mar 2012) | 1 line
deleted the old data dir
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r70 | yushkevich | 2012-03-14 13:14:04 -0400 (Wed, 14 Mar 2012) | 1 line
minor bug fixes
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r69 | yushkevich | 2012-03-02 14:44:32 -0500 (Fri, 02 Mar 2012) | 1 line
added option to export posteriors
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r68 | yushkevich | 2012-02-29 13:51:05 -0500 (Wed, 29 Feb 2012) | 1 line
Updated the linux directory
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r67 | yushkevich | 2012-02-29 13:46:18 -0500 (Wed, 29 Feb 2012) | 1 line
bootstrapping + cleaning up ASHS scripts
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r66 | yushkevich | 2012-02-07 16:20:03 -0500 (Tue, 07 Feb 2012) | 1 line
documentation, cosmetic changes
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r65 | yushkevich | 2012-02-06 13:55:44 -0500 (Mon, 06 Feb 2012) | 1 line
Initial checking
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r64 | yushkevich | 2012-02-06 13:53:03 -0500 (Mon, 06 Feb 2012) | 1 line
Added pointset dir
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r63 | yushkevich | 2012-01-31 15:15:26 -0500 (Tue, 31 Jan 2012) | 1 line
Atlas building code added and seems to work
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r62 | yushkevich | 2012-01-19 16:38:33 -0500 (Thu, 19 Jan 2012) | 1 line
Added exclusion support
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r61 | yushkevich | 2012-01-19 13:10:21 -0500 (Thu, 19 Jan 2012) | 1 line
blah
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r60 | yushkevich | 2012-01-19 13:08:52 -0500 (Thu, 19 Jan 2012) | 1 line
blah
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r59 | yushkevich | 2012-01-19 13:08:02 -0500 (Thu, 19 Jan 2012) | 1 line
Initial Checkin
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r58 | yushkevich | 2012-01-19 13:07:14 -0500 (Thu, 19 Jan 2012) | 1 line
added src dir
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r57 | yushkevich | 2012-01-19 13:03:47 -0500 (Thu, 19 Jan 2012) | 1 line
added src dir
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r56 | yushkevich | 2012-01-19 13:02:28 -0500 (Thu, 19 Jan 2012) | 1 line
added src dir
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r55 | yushkevich | 2011-05-26 09:59:37 -0400 (Thu, 26 May 2011) | 1 line
better checking for existing ANTS output
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r54 | yushkevich | 2010-07-07 08:43:09 -0400 (Wed, 07 Jul 2010) | 1 line
Playing with keywords, version
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r53 | yushkevich | 2010-07-07 08:42:24 -0400 (Wed, 07 Jul 2010) | 1 line
Playing with keywords, version
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r52 | yushkevich | 2010-07-07 08:34:47 -0400 (Wed, 07 Jul 2010) | 1 line
Playing with keywords, version
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r51 | yushkevich | 2010-07-07 08:30:30 -0400 (Wed, 07 Jul 2010) | 1 line
Added version file
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r50 | yushkevich | 2010-07-07 08:30:09 -0400 (Wed, 07 Jul 2010) | 1 line
Added version file
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r49 | yushkevich | 2010-07-07 08:29:41 -0400 (Wed, 07 Jul 2010) | 1 line
Added version file
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r48 | yushkevich | 2010-07-06 17:13:27 -0400 (Tue, 06 Jul 2010) | 1 line
test
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r47 | yushkevich | 2010-07-06 17:11:17 -0400 (Tue, 06 Jul 2010) | 1 line
test
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r46 | yushkevich | 2010-07-06 16:58:15 -0400 (Tue, 06 Jul 2010) | 1 line
anonymized reference image
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r45 | yushkevich | 2010-07-06 14:00:02 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r44 | yushkevich | 2010-07-06 13:55:21 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r43 | yushkevich | 2010-07-06 13:51:02 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r42 | yushkevich | 2010-07-06 13:46:34 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r41 | yushkevich | 2010-07-06 13:41:42 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r40 | yushkevich | 2010-07-06 13:37:06 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r39 | yushkevich | 2010-07-06 13:32:24 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r38 | yushkevich | 2010-07-06 13:27:55 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r37 | yushkevich | 2010-07-06 13:22:41 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r36 | yushkevich | 2010-07-06 13:18:02 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r35 | yushkevich | 2010-07-06 13:13:07 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r34 | yushkevich | 2010-07-06 13:08:11 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r33 | yushkevich | 2010-07-06 13:03:31 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r32 | yushkevich | 2010-07-06 12:58:43 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r31 | yushkevich | 2010-07-06 12:54:22 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r30 | yushkevich | 2010-07-06 12:49:44 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r29 | yushkevich | 2010-07-06 12:44:52 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r28 | yushkevich | 2010-07-06 12:40:14 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r27 | yushkevich | 2010-07-06 12:35:34 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r26 | yushkevich | 2010-07-06 12:30:28 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r25 | yushkevich | 2010-07-06 12:25:32 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r24 | yushkevich | 2010-07-06 12:20:46 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r23 | yushkevich | 2010-07-06 12:16:22 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r22 | yushkevich | 2010-07-06 12:11:37 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r21 | yushkevich | 2010-07-06 12:06:55 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r20 | yushkevich | 2010-07-06 12:02:16 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r19 | yushkevich | 2010-07-06 11:57:27 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r18 | yushkevich | 2010-07-06 11:52:49 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r17 | yushkevich | 2010-07-06 11:48:13 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r16 | yushkevich | 2010-07-06 11:43:28 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r15 | yushkevich | 2010-07-06 11:22:20 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r14 | yushkevich | 2010-07-06 10:57:24 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r13 | yushkevich | 2010-07-06 10:52:37 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r12 | yushkevich | 2010-07-06 10:52:28 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r11 | yushkevich | 2010-07-06 10:21:45 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r10 | yushkevich | 2010-07-06 10:21:01 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r9 | yushkevich | 2010-07-06 10:10:17 -0400 (Tue, 06 Jul 2010) | 1 line
Checked in data directory
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r8 | yushkevich | 2010-06-30 15:32:13 -0400 (Wed, 30 Jun 2010) | 1 line
Checked in data directory
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r7 | yushkevich | 2010-06-30 12:17:26 -0400 (Wed, 30 Jun 2010) | 1 line
added FLIRT to template stage
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r6 | yushkevich | 2010-06-29 13:53:17 -0400 (Tue, 29 Jun 2010) | 1 line
Updated ANTS to later binary to deal with leak
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r5 | yushkevich | 2010-06-29 10:47:00 -0400 (Tue, 29 Jun 2010) | 1 line
Removed pardiso library dependency
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r4 | yushkevich | 2010-06-28 12:45:13 -0400 (Mon, 28 Jun 2010) | 1 line
removed deps on libimf
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r3 | yushkevich | 2010-06-28 10:10:52 -0400 (Mon, 28 Jun 2010) | 1 line
Fix by David Mischel
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r2 | yushkevich | 2010-05-07 10:22:55 -0400 (Fri, 07 May 2010) | 1 line
More error checking and 0.5 time step for SyN
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r1 | yushkevich | 2010-05-07 09:37:25 -0400 (Fri, 07 May 2010) | 1 line
Initial checkin
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