Notes:

Release Name: mass-1.1.0

Notes:

Changes:
Release 1.1.0 (Aug 25, 2014)
-----------------------------

**Major Changes**
- Improved the performance of the ChooseTemplate mechanism (may give different results than the 1.0.0 version)
- Made the package adaptive to different batch processing (job scheduling) softwares
- Added unit and system tests to the package
- Discontinued the ability to generate ventricle masks
- Converted the templates from float to byte
- Added 3 more templates to Templates/WithoutCerebellum
- Made the following changes to the options
- "-sge" -- "-log"
- "-NOSGE" -- "-NOQ"
- "-tmp" -- discontinued
- "-VNmask" -- discontinued
- Added the following options
- "-mask" -- to specify the output mask name
- "-cbq" -- to specify the output intensity image
- "-mem" -- to specify the memory requirement

**Minor Changes**
- Added a mass utility functions script
- Added a feature to retain intermediate files
- Removed all references to SBIA environment variables, making it more generic to systems outside SBIA
- Updated the web addresses to point to the new CBICA website
- Modified the intermediate filenames to allow the user to run multiple instances of mass on images stored in
the same directory
- Added an option to request memory for the mass-registrations and mass-skullstripping jobs, instead of a hardcoded value
- Created a CBICA software webpage for the package
- Made the script adaptive to filenames relative to current working directory
- Modified the mechanism to create temporary directory slightly to accept a user specified directory


Release 1.0.0 (Jan 1, 2013)
-----------------------------

- First stable release.