PubMed Mentions
The links below are to publications on PubMed referring to BrainIAK (Brain Imaging Analysis Kit). This list is gathered weekly from PubMed automatically.
| Publication/References | |
| A probabilistic approach to discovering dynamic full-brain functional connectivity patterns. Description: Manning, Jeremy R, et al. A probabilistic approach to discovering dynamic full-brain functional connectivity patterns. ''Neuroimage''. 2018 Oct 15; '''180''' (Pt A):243-252 | |
| Mapping between fMRI responses to movies and their natural language annotations. Description: Vodrahalli, Kiran, et al. Mapping between fMRI responses to movies and their natural language annotations. ''Neuroimage''. 2018 Oct 15; '''180''' (Pt A):223-231 | |
| Feasibility of topological data analysis for event-related fMRI. Description: Ellis, Cameron T, et al. Feasibility of topological data analysis for event-related fMRI. ''Netw Neurosci''. 2019; '''3''' (3):695-706 | |
| Measuring shared responses across subjects using intersubject correlation. Description: Nastase, Samuel A, et al. Measuring shared responses across subjects using intersubject correlation. ''Soc Cogn Affect Neurosci''. 2019 Aug 7; '''14''' (6):667-685 | |
| BrainIAK tutorials: User-friendly learning materials for advanced fMRI analysis. Description: Kumar, Manoj, et al. BrainIAK tutorials: User-friendly learning materials for advanced fMRI analysis. ''PLoS Comput Biol''. 2020 Jan; '''16''' (1):e1007549 | |
| Facilitating open-science with realistic fMRI simulation: validation and application. Description: Ellis, Cameron T, et al. Facilitating open-science with realistic fMRI simulation: validation and application. ''PeerJ''. 2020; '''8''': e8564 | |
| Tools of the Trade Multivoxel pattern analysis in fMRI: a practical introduction for social and affective neuroscientists. Description: Weaverdyck, Miriam E, et al. Tools of the Trade Multivoxel pattern analysis in fMRI: a practical introduction for social and affective neuroscientists. ''Soc Cogn Affect Neurosci''. 2020 Jun 23; '''15''' (4):487-509 | |
| Incorporating structured assumptions with probabilistic graphical models in fMRI data analysis. Description: Cai, Ming Bo, et al. Incorporating structured assumptions with probabilistic graphical models in fMRI data analysis. ''Neuropsychologia''. 2020 Jul; '''144''': 107500 | |
| Leveraging shared connectivity to aggregate heterogeneous datasets into a common response space. Description: Nastase, Samuel A, et al. Leveraging shared connectivity to aggregate heterogeneous datasets into a common response space. ''Neuroimage''. 2020 Aug 15; '''217''': 116865 | |
| The Amsterdam Open MRI Collection, a set of multimodal MRI datasets for individual difference analyses. Description: Snoek, Lukas, et al. The Amsterdam Open MRI Collection, a set of multimodal MRI datasets for individual difference analyses. ''Sci Data''. 2021 Mar 19; '''8''' (1):85 | |
| Neural alignment predicts learning outcomes in students taking an introduction to computer science course. Description: Meshulam, Meir, et al. Neural alignment predicts learning outcomes in students taking an introduction to computer science course. ''Nat Commun''. 2021 Mar 26; '''12''' (1):1922 | |
| The "Narratives" fMRI dataset for evaluating models of naturalistic language comprehension. Description: Nastase, Samuel A, et al. The "Narratives" fMRI dataset for evaluating models of naturalistic language comprehension. ''Sci Data''. 2021 Sep 28; '''8''' (1):250 | |
| High-level cognition during story listening is reflected in high-order dynamic correlations in neural activity patterns. Description: Owen, Lucy L W, et al. High-level cognition during story listening is reflected in high-order dynamic correlations in neural activity patterns. ''Nat Commun''. 2021 Sep 30; '''12''' (1):5728 | |
| Real-time neurofeedback to alter interpretations of a naturalistic narrative. Description: Mennen, Anne C, et al. Real-time neurofeedback to alter interpretations of a naturalistic narrative. ''Neuroimage Rep''. 2022 Sep; '''2''' (3): | |
| A machine learning approach towards the differentiation between interoceptive and exteroceptive attention. Description: Zuo, Zoey X, et al. A machine learning approach towards the differentiation between interoceptive and exteroceptive attention. ''Eur J Neurosci''. 2023 Jul; '''58''' (2):2523-2546 | |
| Perception and memory retrieval states are reflected in distributed patterns of background functional connectivity. Description: Li, Y Peeta, et al. Perception and memory retrieval states are reflected in distributed patterns of background functional connectivity. ''Neuroimage''. 2023 Aug 1; '''276''': 120221 | |
| Synchronized affect in shared experiences strengthens social connection. Description: Cheong, Jin Hyun, et al. Synchronized affect in shared experiences strengthens social connection. ''Commun Biol''. 2023 Oct 28; '''6''' (1):1099 | |
| High-level cognition is supported by information-rich but compressible brain activity patterns. Description: Owen, Lucy L W, et al. High-level cognition is supported by information-rich but compressible brain activity patterns. ''Proc Natl Acad Sci U S A''. 2024 Aug 27; '''121''' (35):e2400082121 | |
| The medial and lateral orbitofrontal cortex jointly represent the cognitive map of task space. Description: Tan, Liwei, et al. The medial and lateral orbitofrontal cortex jointly represent the cognitive map of task space. ''Commun Biol''. 2025 Feb 3; '''8''' (1):163 | |
| Multivariate Pattern Analysis of fMRI Reveals Striato-Cortical Network Changes in Myoclonus-Dystonia. Description: Marapin, Ramesh S, et al. Multivariate Pattern Analysis of fMRI Reveals Striato-Cortical Network Changes in Myoclonus-Dystonia. ''Eur J Neurol''. 2025 Apr; '''32''' (4):e70085 | |
| Neural dynamics of spontaneous memory recall and future thinking in the continuous flow of thoughts. Description: Su, Haowen, et al. Neural dynamics of spontaneous memory recall and future thinking in the continuous flow of thoughts. ''Nat Commun''. 2025 Jul 11; '''16''' (1):6433 | |
| Effects of progressive aerobic training on neural synchrony and functional connectivity in internet gaming disorder: a randomized controlled fMRI study. Description: Li, Qinxuan, et al. Effects of progressive aerobic training on neural synchrony and functional connectivity in internet gaming disorder: a randomized controlled fMRI study. ''BMC Psychiatry''. 2025 Oct 14; '''25''' (1):986 |