The links below are to publications on PubMed referring to Laboratory of Neuro Imaging (LONI). This list is gathered weekly from PubMed automatically.

Publication/References
Multimodality data integration in epilepsy.
Description: Muzik, Otto, et al. Multimodality data integration in epilepsy. ''Int J Biomed Imaging''. 2007; '''2007''': 13963
Macroscopic brain architecture changes and white matter pathology in acromegaly: a clinicoradiological study.
Description: Sievers, C, et al. Macroscopic brain architecture changes and white matter pathology in acromegaly: a clinicoradiological study. ''Pituitary''. 2009; '''12''' (3):177-85
Baseline MRI predictors of conversion from MCI to probable AD in the ADNI cohort.
Description: Risacher, Shannon L, et al. Baseline MRI predictors of conversion from MCI to probable AD in the ADNI cohort. ''Curr Alzheimer Res''. 2009 Aug; '''6''' (4):347-61
A robust method to estimate the intracranial volume across MRI field strengths (1.5T and 3T).
Description: Keihaninejad, Shiva, et al. A robust method to estimate the intracranial volume across MRI field strengths (1.5T and 3T). ''Neuroimage''. 2010 May 1; '''50''' (4):1427-37
The construction of a Chinese MRI brain atlas: a morphometric comparison study between Chinese and Caucasian cohorts.
Description: Tang, Yuchun, et al. The construction of a Chinese MRI brain atlas: a morphometric comparison study between Chinese and Caucasian cohorts. ''Neuroimage''. 2010 May 15; '''51''' (1):33-41
An in vivo MRI Template Set for Morphometry, Tissue Segmentation, and fMRI Localization in Rats.
Description: Valdes-Hernandez, Pedro Antonio, et al. An in vivo MRI Template Set for Morphometry, Tissue Segmentation, and fMRI Localization in Rats. ''Front Neuroinform''. 2011; '''5''': 26
Specificity of esthetic experience for artworks: an FMRI study.
Description: Di Dio, Cinzia, et al. Specificity of esthetic experience for artworks: an FMRI study. ''Front Hum Neurosci''. 2011; '''5''': 139
Sparse learning and stability selection for predicting MCI to AD conversion using baseline ADNI data.
Description: Ye, Jieping, et al. Sparse learning and stability selection for predicting MCI to AD conversion using baseline ADNI data. ''BMC Neurol''. 2012 Jun 25; '''12''': 46
Association between an Alzheimer's Disease-Related Index and APOE epsilon4 Gene Dose.
Description: Schraml, Frank, et al. Association between an Alzheimer's Disease-Related Index and APOE epsilon4 Gene Dose. ''PLoS One''. 2013; '''8''' (6):e67163
Early indications of future cognitive decline: stable versus declining controls.
Description: Rizk-Jackson, Angela, et al. Early indications of future cognitive decline: stable versus declining controls. ''PLoS One''. 2013; '''8''' (9):e74062
The PSEN1, p.E318G variant increases the risk of Alzheimer's disease in APOE-epsilon4 carriers.
Description: Benitez, Bruno A, et al. The PSEN1, p.E318G variant increases the risk of Alzheimer's disease in APOE-epsilon4 carriers. ''PLoS Genet''. 2013; '''9''' (8):e1003685
Brain structures associated with executive functions during everyday events in a non-clinical sample.
Description: Takeuchi, Hikaru, et al. Brain structures associated with executive functions during everyday events in a non-clinical sample. ''Brain Struct Funct''. 2013 Jul; '''218''' (4):1017-32
Irritable bowel syndrome in female patients is associated with alterations in structural brain networks.
Description: Labus, Jennifer S, et al. Irritable bowel syndrome in female patients is associated with alterations in structural brain networks. ''Pain''. 2014 Jan; '''155''' (1):137-49
MR-less surface-based amyloid assessment based on 11C PiB PET.
Description: Zhou, Luping, et al. MR-less surface-based amyloid assessment based on 11C PiB PET. ''PLoS One''. 2014; '''9''' (1):e84777
The MAPP research network: design, patient characterization and operations.
Description: Landis, J Richard, et al. The MAPP research network: design, patient characterization and operations. ''BMC Urol''. 2014 Aug 1; '''14''': 58
Genome-wide association study of CSF levels of 59 alzheimer's disease candidate proteins: significant associations with proteins involved in amyloid processing and inflammation.
Description: Kauwe, John S K, et al. Genome-wide association study of CSF levels of 59 alzheimer's disease candidate proteins: significant associations with proteins involved in amyloid processing and inflammation. ''PLoS Genet''. 2014 Oct; '''10''' (10):e1004758
Lack of parvalbumin in mice leads to behavioral deficits relevant to all human autism core symptoms and related neural morphofunctional abnormalities.
Description: Wohr, M, et al. Lack of parvalbumin in mice leads to behavioral deficits relevant to all human autism core symptoms and related neural morphofunctional abnormalities. ''Transl Psychiatry''. 2015 Mar 10; '''5''': e525
Engineering the next generation of brain scientists.
Description: Litt, Brian. Engineering the next generation of brain scientists. ''Neuron''. 2015 Apr 8; '''86''' (1):16-20
Acceleration of hippocampal atrophy rates in asymptomatic amyloidosis.
Description: Andrews, K Abigail, et al. Acceleration of hippocampal atrophy rates in asymptomatic amyloidosis. ''Neurobiol Aging''. 2016 Mar; '''39''': 99-107
Automatic labeling of MR brain images by hierarchical learning of atlas forests.
Description: Zhang, Lichi, et al. Automatic labeling of MR brain images by hierarchical learning of atlas forests. ''Med Phys''. 2016 Mar; '''43''' (3):1175-86
Impact of videogame play on the brain's microstructural properties: cross-sectional and longitudinal analyses.
Description: Takeuchi, H, et al. Impact of videogame play on the brain's microstructural properties: cross-sectional and longitudinal analyses. ''Mol Psychiatry''. 2016 Dec; '''21''' (12):1781-1789
Cerebral Blood Flow and Amyloid-beta Interact to Affect Memory Performance in Cognitively Normal Older Adults.
Description: Bangen, Katherine J, et al. Cerebral Blood Flow and Amyloid-beta Interact to Affect Memory Performance in Cognitively Normal Older Adults. ''Front Aging Neurosci''. 2017; '''9''': 181
Hippocampal to basal forebrain transport of Mn(2+) is impaired by deletion of KLC1, a subunit of the conventional kinesin microtubule-based motor.
Description: Medina, Christopher S, et al. Hippocampal to basal forebrain transport of Mn(2+) is impaired by deletion of KLC1, a subunit of the conventional kinesin microtubule-based motor. ''Neuroimage''. 2017 Jan 15; '''145''' (Pt A):44-57
White matter hyperintensities are associated with disproportionate progressive hippocampal atrophy.
Description: Fiford, Cassidy M, et al. White matter hyperintensities are associated with disproportionate progressive hippocampal atrophy. ''Hippocampus''. 2017 Mar; '''27''' (3):249-262
Improved Diagnostic Accuracy of Alzheimer's Disease by Combining Regional Cortical Thickness and Default Mode Network Functional Connectivity: Validated in the Alzheimer's Disease Neuroimaging Initiative Set.
Description: Park, Ji Eun, et al. Improved Diagnostic Accuracy of Alzheimer's Disease by Combining Regional Cortical Thickness and Default Mode Network Functional Connectivity: Validated in the Alzheimer's Disease Neuroimaging Initiative Set. ''Korean J Radiol''. 2017 Nov-Dec; '''18''' (6):983-991
Comparison of Standardized Uptake Value Ratio Calculations in Amyloid Positron Emission Tomography Brain Imaging.
Description: Knesaurek, Karin, et al. Comparison of Standardized Uptake Value Ratio Calculations in Amyloid Positron Emission Tomography Brain Imaging. ''World J Nucl Med''. 2018 Jan-Mar; '''17''' (1):21-26
A Candidate Regulatory Variant at the TREM Gene Cluster Confer Alzheimer's Disease Risk by Modulating Both Amyloid-beta Pathology and Neuronal Degeneration.
Description: Tian, Mei-Ling, et al. A Candidate Regulatory Variant at the TREM Gene Cluster Confer Alzheimer's Disease Risk by Modulating Both Amyloid-beta Pathology and Neuronal Degeneration. ''Front Neurosci''. 2019; '''13''': 742
Early increase of CSF sTREM2 in Alzheimer's disease is associated with tau related-neurodegeneration but not with amyloid-beta pathology.
Description: Suarez-Calvet, Marc, et al. Early increase of CSF sTREM2 in Alzheimer's disease is associated with tau related-neurodegeneration but not with amyloid-beta pathology. ''Mol Neurodegener''. 2019 Jan 10; '''14''' (1):1
Lifespan Changes of the Human Brain In Alzheimer's Disease.
Description: Coupe, Pierrick, et al. Lifespan Changes of the Human Brain In Alzheimer's Disease. ''Sci Rep''. 2019 Mar 8; '''9''' (1):3998
Lactate topography of the human brain using hyperpolarized (13)C-MRI.
Description: Lee, Casey Y, et al. Lactate topography of the human brain using hyperpolarized (13)C-MRI. ''Neuroimage''. 2020 Jan 1; '''204''': 116202
Differential modulation of NREM sleep regulation and EEG topography by chronic sleep restriction in mice.
Description: Kim, Bowon, et al. Differential modulation of NREM sleep regulation and EEG topography by chronic sleep restriction in mice. ''Sci Rep''. 2020 Jan 10; '''10''' (1):18
Pattern of regional white matter hyperintensity volume in mild cognitive impairment subtypes and associations with decline in daily functioning.
Description: Bangen, Katherine J, et al. Pattern of regional white matter hyperintensity volume in mild cognitive impairment subtypes and associations with decline in daily functioning. ''Neurobiol Aging''. 2020 Feb; '''86''': 134-142
Automated White Matter Hyperintensity Segmentation Using Bayesian Model Selection: Assessment and Correlations with Cognitive Change.
Description: Fiford, Cassidy M, et al. Automated White Matter Hyperintensity Segmentation Using Bayesian Model Selection: Assessment and Correlations with Cognitive Change. ''Neuroinformatics''. 2020 Jun; '''18''' (3):429-449
Harnessing peripheral DNA methylation differences in the Alzheimer's Disease Neuroimaging Initiative (ADNI) to reveal novel biomarkers of disease.
Description: Vasanthakumar, Aparna, et al. Harnessing peripheral DNA methylation differences in the Alzheimer's Disease Neuroimaging Initiative (ADNI) to reveal novel biomarkers of disease. ''Clin Epigenetics''. 2020 Jun 15; '''12''' (1):84
AssemblyNet: A large ensemble of CNNs for 3D whole brain MRI segmentation.
Description: Coupe, Pierrick, et al. AssemblyNet: A large ensemble of CNNs for 3D whole brain MRI segmentation. ''Neuroimage''. 2020 Oct 1; '''219''': 117026
Identifying Imaging Genetics Biomarkers of Alzheimer's Disease by Multi-Task Sparse Canonical Correlation Analysis and Regression.
Description: Ke, Fengchun, et al. Identifying Imaging Genetics Biomarkers of Alzheimer's Disease by Multi-Task Sparse Canonical Correlation Analysis and Regression. ''Front Genet''. 2021; '''12''': 706986
Hippocampal transcriptome-wide association study and neurobiological pathway analysis for Alzheimer's disease.
Description: Liu, Nana, et al. Hippocampal transcriptome-wide association study and neurobiological pathway analysis for Alzheimer's disease. ''PLoS Genet''. 2021 Feb; '''17''' (2):e1009363
Toward a unified analysis of cerebellum maturation and aging across the entire lifespan: A MRI analysis.
Description: Romero, Jose E, et al. Toward a unified analysis of cerebellum maturation and aging across the entire lifespan: A MRI analysis. ''Hum Brain Mapp''. 2021 Apr 1; '''42''' (5):1287-1303
Hippocampal glucose uptake as a surrogate of metabolic change of microglia in Alzheimer's disease.
Description: Choi, Hongyoon, et al. Hippocampal glucose uptake as a surrogate of metabolic change of microglia in Alzheimer's disease. ''J Neuroinflammation''. 2021 Aug 31; '''18''' (1):190
Temporo-cerebellar connectivity underlies timing constraints in audition.
Description: Stockert, Anika, et al. Temporo-cerebellar connectivity underlies timing constraints in audition. ''Elife''. 2021 Sep 20; '''10''':
Quantitative Trait Loci Identification by Estimating the Genetic Model based on the Extremal Samples.
Description: Yang, Zining, et al. Quantitative Trait Loci Identification by Estimating the Genetic Model based on the Extremal Samples. ''Curr Genomics''. 2021 Dec 30; '''22''' (5):363-372
ATRI EDC: a novel cloud-native remote data capture system for large multicenter Alzheimer's disease and Alzheimer's disease-related dementias clinical trails.
Description: Jimenez-Maggiora, Gustavo A, et al. ATRI EDC: a novel cloud-native remote data capture system for large multicenter Alzheimer's disease and Alzheimer's disease-related dementias clinical trails. ''JAMIA Open''. 2022 Apr; '''5''' (1):ooab119
Increased regional white matter hyperintensity volume in objectively-defined subtle cognitive decline and mild cognitive impairment.
Description: Calcetas, Amanda T, et al. Increased regional white matter hyperintensity volume in objectively-defined subtle cognitive decline and mild cognitive impairment. ''Neurobiol Aging''. 2022 Oct; '''118''': 1-8
Multi-Omic analyses characterize the ceramide/sphingomyelin pathway as a therapeutic target in Alzheimer's disease.
Description: Baloni, Priyanka, et al. Multi-Omic analyses characterize the ceramide/sphingomyelin pathway as a therapeutic target in Alzheimer's disease. ''Commun Biol''. 2022 Oct 8; '''5''' (1):1074
eICAB: A novel deep learning pipeline for Circle of Willis multiclass segmentation and analysis.
Description: Dumais, Felix, et al. eICAB: A novel deep learning pipeline for Circle of Willis multiclass segmentation and analysis. ''Neuroimage''. 2022 Oct 15; '''260''': 119425
Altered functional connectivity pattern of hippocampal subfields in individuals with objectively-defined subtle cognitive decline and its association with cognition and cerebrospinal fluid biomarkers.
Description: Qiu, Tiantian, et al. Altered functional connectivity pattern of hippocampal subfields in individuals with objectively-defined subtle cognitive decline and its association with cognition and cerebrospinal fluid biomarkers. ''Eur J Neurosci''. 2022 Dec; '''56''' (12):6227-6238
Brain Derived Neurotrophic Factor Interacts with White Matter Hyperintensities to Influence Processing Speed and Hippocampal Volume in Older Adults.
Description: Brenner, Einat K, et al. Brain Derived Neurotrophic Factor Interacts with White Matter Hyperintensities to Influence Processing Speed and Hippocampal Volume in Older Adults. ''J Alzheimers Dis''. 2023; '''93''' (1):141-149
Hypoperfusion Precedes Tau Deposition in the Entorhinal Cortex: A Retrospective Evaluation of ADNI-2 Data.
Description: Kapadia, Anish, et al. Hypoperfusion Precedes Tau Deposition in the Entorhinal Cortex: A Retrospective Evaluation of ADNI-2 Data. ''J Clin Neurol''. 2023 Mar; '''19''' (2):131-137
Evidence against a temporal association between cerebrovascular disease and Alzheimer's disease imaging biomarkers.
Description: Cogswell, Petrice M, et al. Evidence against a temporal association between cerebrovascular disease and Alzheimer's disease imaging biomarkers. ''Nat Commun''. 2023 May 29; '''14''' (1):3097
Pulse pressure and APOE epsilon4 dose interact to affect cerebral blood flow in older adults without dementia.
Description: Edwards, Lauren, et al. Pulse pressure and APOE epsilon4 dose interact to affect cerebral blood flow in older adults without dementia. ''Cereb Circ Cogn Behav''. 2024; '''6''': 100206
Elevated plasma neurofilament light was associated with multi-modal neuroimaging features in Alzheimer's Disease signature regions and predicted future tau deposition.
Description: Hu, Qili, et al. Elevated plasma neurofilament light was associated with multi-modal neuroimaging features in Alzheimer's Disease signature regions and predicted future tau deposition. ''Res Sq''. 2024 Feb 19;