The links below are to publications on PubMed referring to NeuriteTracer. This list is gathered weekly from PubMed automatically.

Publication/References
The Osaka FAD mutation E22Delta leads to the formation of a previously unknown type of amyloid beta fibrils and modulates Abeta neurotoxicity.
Description: Ovchinnikova, Oxana Yu, et al. The Osaka FAD mutation E22Delta leads to the formation of a previously unknown type of amyloid beta fibrils and modulates Abeta neurotoxicity. ''J Mol Biol''. 2011 May 13; '''408''' (4):780-91
NeurphologyJ: an automatic neuronal morphology quantification method and its application in pharmacological discovery.
Description: Ho, Shinn-Ying, et al. NeurphologyJ: an automatic neuronal morphology quantification method and its application in pharmacological discovery. ''BMC Bioinformatics''. 2011 Jun 8; '''12''': 230
Comparison of the force exerted by hippocampal and DRG growth cones.
Description: Amin, Ladan, et al. Comparison of the force exerted by hippocampal and DRG growth cones. ''PLoS One''. 2013; '''8''' (8):e73025
Neurient: an algorithm for automatic tracing of confluent neuronal images to determine alignment.
Description: Mitchel, Jennifer A, et al. Neurient: an algorithm for automatic tracing of confluent neuronal images to determine alignment. ''J Neurosci Methods''. 2013 Apr 15; '''214''' (2):210-22
Excitotoxin-induced caspase-3 activation and microtubule disintegration in axons is inhibited by taxol.
Description: King, Anna Elizabeth, et al. Excitotoxin-induced caspase-3 activation and microtubule disintegration in axons is inhibited by taxol. ''Acta Neuropathol Commun''. 2013 Sep 9; '''1''': 59
Plasminogen deficiency causes reduced corticospinal axonal plasticity and functional recovery after stroke in mice.
Description: Liu, Zhongwu, et al. Plasminogen deficiency causes reduced corticospinal axonal plasticity and functional recovery after stroke in mice. ''PLoS One''. 2014; '''9''' (4):e94505
AMPK activation regulates neuronal structure in developing hippocampal neurons.
Description: Ramamurthy, S, et al. AMPK activation regulates neuronal structure in developing hippocampal neurons. ''Neuroscience''. 2014 Feb 14; '''259''': 13-24
Proteoglycans of reactive rat cortical astrocyte cultures: abundance of N-unsubstituted glucosamine-enriched heparan sulfate.
Description: Hering, Thomas M, et al. Proteoglycans of reactive rat cortical astrocyte cultures: abundance of N-unsubstituted glucosamine-enriched heparan sulfate. ''Matrix Biol''. 2015 Jan; '''41''': 8-18
Neuritin 1 promotes retinal ganglion cell survival and axonal regeneration following optic nerve crush.
Description: Sharma, T P, et al. Neuritin 1 promotes retinal ganglion cell survival and axonal regeneration following optic nerve crush. ''Cell Death Dis''. 2015 Feb 26; '''6''': e1661
Protection against beta-amyloid-induced synaptic and memory impairments via altering beta-amyloid assembly by bis(heptyl)-cognitin.
Description: Chang, Lan, et al. Protection against beta-amyloid-induced synaptic and memory impairments via altering beta-amyloid assembly by bis(heptyl)-cognitin. ''Sci Rep''. 2015 Jul 21; '''5''': 10256
GDF10 is a signal for axonal sprouting and functional recovery after stroke.
Description: Li, Songlin, et al. GDF10 is a signal for axonal sprouting and functional recovery after stroke. ''Nat Neurosci''. 2015 Dec; '''18''' (12):1737-45
A painful neuropathy-associated Nav1.7 mutant leads to time-dependent degeneration of small-diameter axons associated with intracellular Ca2+ dysregulation and decrease in ATP levels.
Description: Rolyan, Harshvardhan, et al. A painful neuropathy-associated Nav1.7 mutant leads to time-dependent degeneration of small-diameter axons associated with intracellular Ca2+ dysregulation and decrease in ATP levels. ''Mol Pain''. 2016; '''12''':
Microfluidic neurite guidance to study structure-function relationships in topologically-complex population-based neural networks.
Description: Honegger, Thibault, et al. Microfluidic neurite guidance to study structure-function relationships in topologically-complex population-based neural networks. ''Sci Rep''. 2016 Jun 22; '''6''': 28384
Atf3 mutant mice show reduced axon regeneration and impaired regeneration-associated gene induction after peripheral nerve injury.
Description: Gey, Manuel, et al. Atf3 mutant mice show reduced axon regeneration and impaired regeneration-associated gene induction after peripheral nerve injury. ''Open Biol''. 2016 Aug; '''6''' (8):
NeuronCyto II: An automatic and quantitative solution for crossover neural cells in high throughput screening.
Description: Ong, Kok Haur, et al. NeuronCyto II: An automatic and quantitative solution for crossover neural cells in high throughput screening. ''Cytometry A''. 2016 Aug; '''89''' (8):747-54
Existence of muscarinic acetylcholine receptor (mAChR) and fibroblast growth factor receptor (FGFR) heteroreceptor complexes and their enhancement of neurite outgrowth in neural hippocampal cultures.
Description: Di Liberto, V, et al. Existence of muscarinic acetylcholine receptor (mAChR) and fibroblast growth factor receptor (FGFR) heteroreceptor complexes and their enhancement of neurite outgrowth in neural hippocampal cultures. ''Biochim Biophys Acta Gen Subj''. 2017 Feb; '''1861''' (2):235-245
Neuroblast differentiation during development and in neuroblastoma requires KIF1Bbeta-mediated transport of TRKA.
Description: Fell, Stuart M, et al. Neuroblast differentiation during development and in neuroblastoma requires KIF1Bbeta-mediated transport of TRKA. ''Genes Dev''. 2017 May 15; '''31''' (10):1036-1053
Jak kinase 3 signaling in microgliogenesis from the spinal nestin+ progenitors in both development and response to injury.
Description: Barua, Sumit, et al. Jak kinase 3 signaling in microgliogenesis from the spinal nestin+ progenitors in both development and response to injury. ''Neuroreport''. 2017 Sep 27; '''28''' (14):929-935
Mutations in THAP1/DYT6 reveal that diverse dystonia genes disrupt similar neuronal pathways and functions.
Description: Zakirova, Zuchra, et al. Mutations in THAP1/DYT6 reveal that diverse dystonia genes disrupt similar neuronal pathways and functions. ''PLoS Genet''. 2018 Jan; '''14''' (1):e1007169
Simple and Inexpensive Paper-Based Astrocyte Co-culture to Improve Survival of Low-Density Neuronal Networks.
Description: Aebersold, Mathias J, et al. Simple and Inexpensive Paper-Based Astrocyte Co-culture to Improve Survival of Low-Density Neuronal Networks. ''Front Neurosci''. 2018; '''12''': 94
RNF12 X-Linked Intellectual Disability Mutations Disrupt E3 Ligase Activity and Neural Differentiation.
Description: Bustos, Francisco, et al. RNF12 X-Linked Intellectual Disability Mutations Disrupt E3 Ligase Activity and Neural Differentiation. ''Cell Rep''. 2018 May 8; '''23''' (6):1599-1611
Nucleic acid-induced potentiation of matrix metalloproteinase-9 enzymatic activity.
Description: Duellman, Tyler, et al. Nucleic acid-induced potentiation of matrix metalloproteinase-9 enzymatic activity. ''Biochem J''. 2018 May 9; '''475''' (9):1597-1610
Pretectal neurons control hunting behaviour.
Description: Antinucci, Paride, et al. Pretectal neurons control hunting behaviour. ''Elife''. 2019 Oct 8; '''8''':
Isolation of microglia-derived extracellular vesicles: towards miRNA signatures and neuroprotection.
Description: Lemaire, Quentin, et al. Isolation of microglia-derived extracellular vesicles: towards miRNA signatures and neuroprotection. ''J Nanobiotechnology''. 2019 Dec 4; '''17''' (1):119
A Connected Network of Interacting Proteins Is Involved in Human-Tau Toxicity in Drosophila.
Description: Feuillette, Sebastien, et al. A Connected Network of Interacting Proteins Is Involved in Human-Tau Toxicity in Drosophila. ''Front Neurosci''. 2020; '''14''': 68
Activated Bone Marrow-Derived Macrophages Eradicate Alzheimer's-Related Abeta42 Oligomers and Protect Synapses.
Description: Li, Songlin, et al. Activated Bone Marrow-Derived Macrophages Eradicate Alzheimer's-Related Abeta42 Oligomers and Protect Synapses. ''Front Immunol''. 2020; '''11''': 49
Contributions of Chondroitin Sulfate, Keratan Sulfate and N-linked Oligosaccharides to Inhibition of Neurite Outgrowth by Aggrecan.
Description: Hering, Thomas M, et al. Contributions of Chondroitin Sulfate, Keratan Sulfate and N-linked Oligosaccharides to Inhibition of Neurite Outgrowth by Aggrecan. ''Biology (Basel)''. 2020 Feb 12; '''9''' (2):
4D Self-Morphing Culture Substrate for Modulating Cell Differentiation.
Description: Miao, Shida, et al. 4D Self-Morphing Culture Substrate for Modulating Cell Differentiation. ''Adv Sci (Weinh)''. 2020 Mar; '''7''' (6):1902403
The histone deacetylase complex MiDAC regulates a neurodevelopmental gene expression program to control neurite outgrowth.
Description: Mondal, Baisakhi, et al. The histone deacetylase complex MiDAC regulates a neurodevelopmental gene expression program to control neurite outgrowth. ''Elife''. 2020 Apr 16; '''9''':
Chitinase 3-like 1 is neurotoxic in primary cultured neurons.
Description: Matute-Blanch, Clara, et al. Chitinase 3-like 1 is neurotoxic in primary cultured neurons. ''Sci Rep''. 2020 Apr 28; '''10''' (1):7118
NBS1 interacts with Notch signaling in neuronal homeostasis.
Description: Zhou, Zhong-Wei, et al. NBS1 interacts with Notch signaling in neuronal homeostasis. ''Nucleic Acids Res''. 2020 Nov 4; '''48''' (19):10924-10939
Dose-dependent immunomodulatory effects of bortezomib in experimental autoimmune neuritis.
Description: Klimas, Rafael, et al. Dose-dependent immunomodulatory effects of bortezomib in experimental autoimmune neuritis. ''Brain Commun''. 2021; '''3''' (4):fcab238
Chronic cerebral lipocalin 2 exposure elicits hippocampal neuronal dysfunction and cognitive impairment.
Description: Olson, Brennan, et al. Chronic cerebral lipocalin 2 exposure elicits hippocampal neuronal dysfunction and cognitive impairment. ''Brain Behav Immun''. 2021 Oct; '''97''': 102-118
Synergy of Nanotopography and Electrical Conductivity of PEDOT/PSS for Enhanced Neuronal Development.
Description: Bianchi, Michele, et al. Synergy of Nanotopography and Electrical Conductivity of PEDOT/PSS for Enhanced Neuronal Development. ''ACS Appl Mater Interfaces''. 2023 Dec 27; '''15''' (51):59224-59235
hnRNP A1 dysfunction alters RNA splicing and drives neurodegeneration in multiple sclerosis (MS).
Description: Salapa, Hannah E, et al. hnRNP A1 dysfunction alters RNA splicing and drives neurodegeneration in multiple sclerosis (MS). ''Nat Commun''. 2024 Jan 8; '''15''' (1):356
From pixels to connections: exploring in vitro neuron reconstruction software for network graph generation.
Description: Hoffmann, Cassandra, et al. From pixels to connections: exploring in vitro neuron reconstruction software for network graph generation. ''Commun Biol''. 2024 May 15; '''7''' (1):571
Loss-of-function variants in RNA binding motif protein X-linked induce neuronal defects contributing to amyotrophic lateral sclerosis pathogenesis.
Description: He, Di, et al. Loss-of-function variants in RNA binding motif protein X-linked induce neuronal defects contributing to amyotrophic lateral sclerosis pathogenesis. ''MedComm (2020)''. 2024 Sep; '''5''' (9):e712