help
help > RE: error on SPHARM-PDM
Dec 3, 2014 08:12 PM | Sohae Chung
RE: error on SPHARM-PDM
Hello Martin,
I download Slicer 4.3.1 for mac and added Shape Analysis Module. I run the tutorial datasets (4data) and still got errors.
Would you check this? Thanks!
-----------------------------------------------------------------------------------------
Found CommandLine Module, target is /Users/macpro/Documents/Program/3DSlicer/Slicer4.3.1/Slicer.app/Contents/Extensions-22599/SPHARM-PDM/lib/Slicer-4.3/cli-modules/ShapeAnalysisModule
ModuleType: CommandLineModule
Shape Analysis Module command line:
/Users/macpro/Documents/Program/3DSlicer/Slicer4.3.1/Slicer.app/Contents/Extensions-22599/SPHARM-PDM/lib/Slicer-4.3/cli-modules/ShapeAnalysisModule --RescaleSegPostProcess --sx 0.5 --sy 0.5 --sz 0.5 --label 1 --NumberofIterations 10 --SubdivLevelValue 10 --SPHARMDegreeValue 15 --thetaIterationValue 100 --phiIterationValue 100 --columVolumeFile 0 --varX 10 --varY 10 --varZ 10 --regTemplate None --flipTemplate None --paraOutTemplate --noFlip --HorizontalGridPara 5 --VerticalGridPara 5 --UseProcalign --startRegularization 10 --endRegularization 0.01 --optimizationIt 200 --RelativeWeight 1 /Users/macpro/Documents/Program/3DSlicer/ShapeAnalysisModule_TutorialData/InputFile_ShapeAnalaysis_4data.csv /Users/macpro/Documents/Program/3DSlicer/ShapeAnalysisModule_TutorialData/results
---------------------------------------------------------------------------------------------
Shape Analysis Module standard output:
------ Shape Analysis Module start -----
Computing ShapeAnalysisModule...
/Users/macpro/Documents/Program/3DSlicer/ShapeAnalysisModule_TutorialData/results/
/Users/macpro/Documents/Program/3DSlicer/ShapeAnalysisModule_TutorialData/results/ShapeAnalysisModule.bms
----------------------------------------------------------------------------------------------
ERROR: In /Users/kitware/Dashboards/Package/Slicer-431/Base/QTCLI/vtkSlicerCLIModuleLogic.cxx, line 2042
vtkSlicerCLIModuleLogic (0x13a83c070): Shape Analysis Module terminated with a fault.
I download Slicer 4.3.1 for mac and added Shape Analysis Module. I run the tutorial datasets (4data) and still got errors.
Would you check this? Thanks!
-----------------------------------------------------------------------------------------
Found CommandLine Module, target is /Users/macpro/Documents/Program/3DSlicer/Slicer4.3.1/Slicer.app/Contents/Extensions-22599/SPHARM-PDM/lib/Slicer-4.3/cli-modules/ShapeAnalysisModule
ModuleType: CommandLineModule
Shape Analysis Module command line:
/Users/macpro/Documents/Program/3DSlicer/Slicer4.3.1/Slicer.app/Contents/Extensions-22599/SPHARM-PDM/lib/Slicer-4.3/cli-modules/ShapeAnalysisModule --RescaleSegPostProcess --sx 0.5 --sy 0.5 --sz 0.5 --label 1 --NumberofIterations 10 --SubdivLevelValue 10 --SPHARMDegreeValue 15 --thetaIterationValue 100 --phiIterationValue 100 --columVolumeFile 0 --varX 10 --varY 10 --varZ 10 --regTemplate None --flipTemplate None --paraOutTemplate --noFlip --HorizontalGridPara 5 --VerticalGridPara 5 --UseProcalign --startRegularization 10 --endRegularization 0.01 --optimizationIt 200 --RelativeWeight 1 /Users/macpro/Documents/Program/3DSlicer/ShapeAnalysisModule_TutorialData/InputFile_ShapeAnalaysis_4data.csv /Users/macpro/Documents/Program/3DSlicer/ShapeAnalysisModule_TutorialData/results
---------------------------------------------------------------------------------------------
Shape Analysis Module standard output:
------ Shape Analysis Module start -----
Computing ShapeAnalysisModule...
/Users/macpro/Documents/Program/3DSlicer/ShapeAnalysisModule_TutorialData/results/
/Users/macpro/Documents/Program/3DSlicer/ShapeAnalysisModule_TutorialData/results/ShapeAnalysisModule.bms
----------------------------------------------------------------------------------------------
ERROR: In /Users/kitware/Dashboards/Package/Slicer-431/Base/QTCLI/vtkSlicerCLIModuleLogic.cxx, line 2042
vtkSlicerCLIModuleLogic (0x13a83c070): Shape Analysis Module terminated with a fault.
Threaded View
| Title | Author | Date |
|---|---|---|
| Sohae Chung | Nov 26, 2014 | |
| Martin Styner | Dec 3, 2014 | |
| Martin Styner | Dec 3, 2014 | |
| Sohae Chung | Dec 3, 2014 | |
