help > could not create IO object error
Aug 16, 2019  11:08 PM | petemade
could not create IO object error
Hi,

In running the RHL6 version (and python 3.7), we are receiving consistent errors with the ImageMath and BRAINSFit tools such that the itkImageFileReader "Could not create IO object for reading file". This results in command termination and empty skullstripping, TissueSegAtlas, and VentricleMasking output folders. 

A sample error with the LargeCSF01 T1 and T2 files: Following error(s) occured : terminate called after throwing an instance of 'itk::ImmageFileReaderException' what (): /tools/ITK/ITKv4.10.0/ITKv4.10.0_THL64_stat_Release/include/ITK-4.10/itkImageFileReader.hxx:143: Could not create IO object for reading the file LargerCSF01_T1_FinalBrainMask_Erosion01.nrrd The file doesn't exist. Filename = LargeCSF01_T1_FinalBrainMask_Erosion01.nrrd

Are some dependencies missing or has something else gone awry?

Thanks,
Maddy

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TitleAuthorDate
could not create IO object error
petemade Aug 16, 2019
Martin Styner Aug 17, 2019
petemade Aug 26, 2019
Martin Styner Aug 27, 2019
petemade Sep 6, 2019