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help > RE: could not create IO object error
Aug 27, 2019 12:08 AM | Martin Styner
RE: could not create IO object error
Thanks Maddy
If you look at the output, the first step has an immidiate error (BRAINSFit). There is nothing specified for the fixedvolume (your template), which means you did not specify a template for the registration.
So, if you want to do the atlas/reference registration, you need to specify the template file in the corresponding first step tab.
Btw I see that you are using a file called ICBM_T1.nrrd. So, you probably do not need to do a reference space registration, as your data is already in ICBM space, correct? So, just skip that first step (disable that step in the first step tab).
Martin
Originally posted by petemade:
If you look at the output, the first step has an immidiate error (BRAINSFit). There is nothing specified for the fixedvolume (your template), which means you did not specify a template for the registration.
So, if you want to do the atlas/reference registration, you need to specify the template file in the corresponding first step tab.
Btw I see that you are using a file called ICBM_T1.nrrd. So, you probably do not need to do a reference space registration, as your data is already in ICBM space, correct? So, just skip that first step (disable that step in the first step tab).
Martin
Originally posted by petemade:
Hi,
Thank you for your previous suggestions. I haven't seen any "can't create IO object for writing" errors--just the "reading" ones. Hence, I have attached a complete output_log.
Thanks again,
Maddy
Thank you for your previous suggestions. I haven't seen any "can't create IO object for writing" errors--just the "reading" ones. Hence, I have attached a complete output_log.
Thanks again,
Maddy
Threaded View
| Title | Author | Date |
|---|---|---|
| petemade | Aug 16, 2019 | |
| Martin Styner | Aug 17, 2019 | |
| petemade | Aug 26, 2019 | |
| Martin Styner | Aug 27, 2019 | |
| petemade | Sep 6, 2019 | |