Hello,

Having some issues with the Dicoms coming out of mri_reface. The original data I am feeding it are T1Wtd directories, and the defaced niftis look great, but that is not the case with the output Dicoms. The output dicoms seem to be jittery, with the brain staying still but the skull and everything else shifting in orientation and contrast every few slices. Has anyone ever seen this before? Any help would be appreciated.

Sincerely,

Daniel Balentine