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help > RE: shape-analysis on freesurfer models?
Jun 20, 2013 03:06 PM | Christian Buhl
RE: shape-analysis on freesurfer models?
Now it works perfectly...
I ended up using a modified version of 1.12 Spharm - to which I added KWMeshVisu, MANCOVA_Wizard and libs from version 1.9; and set TKL-version manually to TKL8.4 from the 3D slicer library.
The shapes were exported from Aseg.mgz using MRI-binarize command with match-flag. They were exported in nifti-format (nii.gz).
These files were then converted into *.gipl using ITKsnap.
The binary volumes were 256x256x256 with a voxelsize of 1x1x1mm. The ShapeAnalysisModule command was adjusted accordingly.
It is great tool! (I had to use KWMeshVisu, because the MRML-creation didn't work).
I ended up using a modified version of 1.12 Spharm - to which I added KWMeshVisu, MANCOVA_Wizard and libs from version 1.9; and set TKL-version manually to TKL8.4 from the 3D slicer library.
The shapes were exported from Aseg.mgz using MRI-binarize command with match-flag. They were exported in nifti-format (nii.gz).
These files were then converted into *.gipl using ITKsnap.
The binary volumes were 256x256x256 with a voxelsize of 1x1x1mm. The ShapeAnalysisModule command was adjusted accordingly.
It is great tool! (I had to use KWMeshVisu, because the MRML-creation didn't work).
Threaded View
| Title | Author | Date |
|---|---|---|
| Christian Buhl | Jun 13, 2013 | |
| Beatriz Paniagua | Jun 14, 2013 | |
| Christian Buhl | Jun 15, 2013 | |
| Christian Buhl | Jun 15, 2013 | |
| Christian Buhl | Jun 20, 2013 | |