Release Name: 2.0.0
Notes:
SeeCAT 2.0.0 is a rewrite of the Seed-based Connectivity
Analysis Toolbox. It is a MATLAB toolbox for brain functional
connectivity analysis of resting-state fMRI, from a BIDS dataset to
BIDS-derivatives outputs.
It covers:
- DICOM to BIDS (dcm2niix included)
- preprocessing, or fMRIPrep outputs as input
- denoising
- seed-based functional connectivity
- voxel-wise degree centrality
- connectivity gradients
- multi-site harmonisation (ComBat)
- group statistics
- viewing
It needs only SPM (SPM25, or SPM12 r7771 or later) and is
developed and tested on MATLAB R2025a.
The zip contains the toolbox, the English and Chinese PDF
manuals (Doc/manual/) and dcm2niix v1.0.20260724 for Windows, macOS
and Linux.
To install, unzip it and run addpath('path/to/spm');
addpath('path/to/SeeCAT-2.0.0/SeeCAT'); then type SeeCAT to open
the window.
Source code and issues: https://github.com/mingruixia/SeeCAT
SHA-256 of SeeCAT-2.0.0.zip:
0d98e1fdcd95056463e02d3a7716e3b3add432f2585541308903c8f3efd1955f
Changes:
2.0.0 replaces the 1.x beta. It no longer uses DPABI or the
FunImgARW folder layout, and all outputs follow BIDS derivatives.
The full list of changes is in CHANGELOG.md in the zip and at
https://github.com/mingruixia/SeeCAT/blob/v2.0.0/CHANGELOG.md.
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