SpiCoDyn

SPICODYN is an automated and efficient open-source software for the analysis of multi-site neuronal spike signals. Accepted input data formats are HDF5, level 5 MAT and text files, containing recorded or generated time series spike signals data. SPICODYN processes such electrophysiological signals focusing on: spiking and bursting dynamics and functional-effective connectivity analysis. In particular, for inferring network connectivity, a new implementation of the transfer entropy (TE) method is presented dealing with multiple time delays (temporal extension) and with multiple binary patterns (high order extension). SPICODYN is specifically tailored to process data coming from different Multi-Electrode Arrays (MEAs) setups, guarantying, in those specific cases, automated processing. The optimized implementation of the Delayed Transfer Entropy (DTE) and the High-Order Transfer Entropy (HOTE) algorithms, allows performing accurate and rapid analysis on multiple spike trains from thousands of electrodes.
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Domain:Computational Neuroscience

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spicodyn: SpiCoDyn v_1.6 setup  release

Install_SpiCoDyn_1_6.zip posted by Vito PAOLO PASTORE on Oct 16

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spicodyn: SpiCoDyn_latest_version_source code  release

SpiCoDyn_1.6.zip posted by Vito PAOLO PASTORE on Oct 16

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spicodyn: SpiCoDyn_Releases_LOG release

SpiCoDyn_Releases_LOG.pdf posted by Vito PAOLO PASTORE on Oct 16

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spicodyn: SpiCoDyn v_1.5 setup release

Install_SpiCoDyn1_5.zip posted by Vito PAOLO PASTORE on Oct 6

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spicodyn: Dummy Recordings release

Data2Share.rar posted by Vito PAOLO PASTORE on Sep 19

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spicodyn: Dummy Recordings release

DataFileREADME.txt posted by Vito PAOLO PASTORE on Sep 19

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spicodyn: SpiCoDyn user guide  release

Userguide.mp4 posted by Vito PAOLO PASTORE on Sep 15

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spicodyn: SpiCoDyn v_1.4 setup release

Install_SpiCoDyn.msi posted by Vito PAOLO PASTORE on Sep 15