NITRC: NIPY Structural and Functional Analysis: PubMed Mentions: Display Document

PubMed Mentions

The links below are to publications on PubMed referring to NIPY Structural and Functional Analysis. This list is gathered weekly from PubMed automatically and was last updated on February 21, 2026.

Publication/References
The default modes of reading: modulation of posterior cingulate and medial prefrontal cortex connectivity associated with comprehension and task focus while reading. Description: Smallwood, Jonathan, et al. The default modes of reading: modulation of posterior cingulate and medial prefrontal cortex connectivity associated with comprehension and task focus while reading. ''Front Hum Neurosci''. 2013; '''7''': 734
Dissociation of working memory impairments and attention-deficit/hyperactivity disorder in the brain. Description: Mattfeld, Aaron T, et al. Dissociation of working memory impairments and attention-deficit/hyperactivity disorder in the brain. ''Neuroimage Clin''. 2016; '''10''': 274-82
Formal Models of the Network Co-occurrence Underlying Mental Operations. Description: Bzdok, Danilo, et al. Formal Models of the Network Co-occurrence Underlying Mental Operations. ''PLoS Comput Biol''. 2016 Jun; '''12''' (6):e1004994
The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Description: Gorgolewski, Krzysztof J, et al. The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. ''Sci Data''. 2016 Jun 21; '''3''': 160044
Pypes: Workflows for Processing Multimodal Neuroimaging Data. Description: Savio, Alexandre M, et al. Pypes: Workflows for Processing Multimodal Neuroimaging Data. ''Front Neuroinform''. 2017; '''11''': 25
A Systematic Relationship Between Functional Connectivity and Intracortical Myelin in the Human Cerebral Cortex. Description: Huntenburg, Julia M, et al. A Systematic Relationship Between Functional Connectivity and Intracortical Myelin in the Human Cerebral Cortex. ''Cereb Cortex''. 2017 Feb 1; '''27''' (2):981-997
The neural representation of personally familiar and unfamiliar faces in the distributed system for face perception. Description: Visconti di Oleggio Castello, Matteo, et al. The neural representation of personally familiar and unfamiliar faces in the distributed system for face perception. ''Sci Rep''. 2017 Sep 25; '''7''' (1):12237
Amygdala-medial prefrontal connectivity relates to stress and mental health in early childhood. Description: Park, Anne T, et al. Amygdala-medial prefrontal connectivity relates to stress and mental health in early childhood. ''Soc Cogn Affect Neurosci''. 2018 Mar 6;
Occipitotemporal representations reflect individual differences in conceptual knowledge. Description: Braunlich, Kurt, et al. Occipitotemporal representations reflect individual differences in conceptual knowledge. ''J Exp Psychol Gen''. 2019 Jul; '''148''' (7):1192-1203
PECLIDES Neuro: A Personalisable Clinical Decision Support System for Neurological Diseases. Description: Muller, Tamara T, et al. PECLIDES Neuro: A Personalisable Clinical Decision Support System for Neurological Diseases. ''Front Artif Intell''. 2020; '''3''': 23
Pyneal: Open Source Real-Time fMRI Software. Description: MacInnes, Jeff J, et al. Pyneal: Open Source Real-Time fMRI Software. ''Front Neurosci''. 2020; '''14''': 900
Pypreclin: An automatic pipeline for macaque functional MRI preprocessing. Description: Tasserie, Jordy, et al. Pypreclin: An automatic pipeline for macaque functional MRI preprocessing. ''Neuroimage''. 2020 Feb 15; '''207''': 116353
The effect of capsulated and noncapsulated egg-yolk-specific antibody to reduce colonization in the intestine of Salmonella enterica ssp. enterica serovar Infantis-challenged broiler chickens. Description: Hatamzade Isfahani, Nasim, et al. The effect of capsulated and noncapsulated egg-yolk-specific antibody to reduce colonization in the intestine of Salmonella enterica ssp. enterica serovar Infantis-challenged broiler chickens. ''Poult Sci''. 2020 Mar; '''99''' (3):1387-1394
Influences of affective context on amygdala functional connectivity during cognitive control from adolescence through adulthood. Description: Ravindranath, Orma, et al. Influences of affective context on amygdala functional connectivity during cognitive control from adolescence through adulthood. ''Dev Cogn Neurosci''. 2020 Aug 14; '''45''': 100836
Systemic inflammation is associated with differential neural reactivity and connectivity to affective images. Description: Alvarez, Gabriella M, et al. Systemic inflammation is associated with differential neural reactivity and connectivity to affective images. ''Soc Cogn Affect Neurosci''. 2020 Nov 10; '''15''' (10):1024-1033
Evaluation of Task fMRI Decoding With Deep Learning on a Small Sample Dataset. Description: Yotsutsuji, Sunao, et al. Evaluation of Task fMRI Decoding With Deep Learning on a Small Sample Dataset. ''Front Neuroinform''. 2021; '''15''': 577451
Neural Correlates of Long-Term Memory Enhancement Following Retrieval Practice. Description: Marin-Garcia, Eugenia, et al. Neural Correlates of Long-Term Memory Enhancement Following Retrieval Practice. ''Front Hum Neurosci''. 2021; '''15''': 584560
Early childhood stress is associated with blunted development of ventral tegmental area functional connectivity. Description: Park, Anne T, et al. Early childhood stress is associated with blunted development of ventral tegmental area functional connectivity. ''Dev Cogn Neurosci''. 2021 Feb; '''47''': 100909
Endogenous variation in ventromedial prefrontal cortex state dynamics during naturalistic viewing reflects affective experience. Description: Chang, Luke J, et al. Endogenous variation in ventromedial prefrontal cortex state dynamics during naturalistic viewing reflects affective experience. ''Sci Adv''. 2021 Apr; '''7''' (17):
Hyperrealistic neural decoding for reconstructing faces from fMRI activations via the GAN latent space. Description: Dado, Thirza, et al. Hyperrealistic neural decoding for reconstructing faces from fMRI activations via the GAN latent space. ''Sci Rep''. 2022 Jan 7; '''12''' (1):141
Motor sequences; separating the sequence from the motor. A longitudinal rsfMRI study. Description: Jager, Anna-Thekla P, et al. Motor sequences; separating the sequence from the motor. A longitudinal rsfMRI study. ''Brain Struct Funct''. 2022 Apr; '''227''' (3):793-807
Orthogonal representations for robust context-dependent task performance in brains and neural networks. Description: Flesch, Timo, et al. Orthogonal representations for robust context-dependent task performance in brains and neural networks. ''Neuron''. 2022 Apr 6; '''110''' (7):1258-1270.e11
Early stressful experiences are associated with reduced neural responses to naturalistic emotional and social content in children. Description: Park, Anne T, et al. Early stressful experiences are associated with reduced neural responses to naturalistic emotional and social content in children. ''Dev Cogn Neurosci''. 2022 Sep 16; '''57''': 101152
Distinct roles for the anterior temporal lobe and angular gyrus in the spatiotemporal cortical semantic network. Description: Farahibozorg, Seyedeh-Rezvan, et al. Distinct roles for the anterior temporal lobe and angular gyrus in the spatiotemporal cortical semantic network. ''Cereb Cortex''. 2022 Oct 8; '''32''' (20):4549-4564
Pubertal development underlies optimization of inhibitory control through specialization of ventrolateral prefrontal cortex. Description: Ravindranath, Orma, et al. Pubertal development underlies optimization of inhibitory control through specialization of ventrolateral prefrontal cortex. ''Dev Cogn Neurosci''. 2022 Oct 14; '''58''': 101162
Extensive topographic remapping and functional sharpening in the adult rat visual pathway upon first visual experience. Description: Carvalho, Joana, et al. Extensive topographic remapping and functional sharpening in the adult rat visual pathway upon first visual experience. ''PLoS Biol''. 2023 Aug; '''21''' (8):e3002229
Voxel-wise Fusion of Resting fMRI Networks and Gray Matter Volume for Alzheimer's Disease Classification using Deep Multimodal Learning. Description: Itkyal, Vaibhavi S, et al. Voxel-wise Fusion of Resting fMRI Networks and Gray Matter Volume for Alzheimer's Disease Classification using Deep Multimodal Learning. ''Res Sq''. 2023 Dec 13;
Mapping functional traces of opioid memories in the rat brain. Description: Gomes-Ribeiro, Joana, et al. Mapping functional traces of opioid memories in the rat brain. ''Brain Commun''. 2024; '''6''' (5):fcae281
Reward-based option competition in human dorsal stream and transition from stochastic exploration to exploitation in continuous space. Description: Hallquist, Michael N, et al. Reward-based option competition in human dorsal stream and transition from stochastic exploration to exploitation in continuous space. ''Sci Adv''. 2024 Feb 23; '''10''' (8):eadj2219
Olfactory Dysfunction and Limbic Hypoactivation in Temporal Lobe Epilepsy. Description: Schmidt, Markus, et al. Olfactory Dysfunction and Limbic Hypoactivation in Temporal Lobe Epilepsy. ''Hum Brain Mapp''. 2024 Nov; '''45''' (16):e70061
Prefrontal default-mode network interactions with posterior hippocampus during exploration. Description: Papale, Andrew E, et al. Prefrontal default-mode network interactions with posterior hippocampus during exploration. ''bioRxiv''. 2025 Mar 13;