open-discussion
open-discussion > RE: About Hardi
Feb 18, 2015 04:02 PM | Konstantinos Arfanakis - Illinois Institute of Technology
RE: About Hardi
Hi Luca,
What we have uploaded is FODs and not diffusion-weighted (DW) data. The reason is that to get to FODs from our DW data you need to be able to read our diffusion gradient file (this is what you are looking for). However, the way we constructed the HARDI template, each voxel has a different diffusion file. This means that users would not be able to use our DW data to reconstruct FODs with any existing software, because none of the existing software would be able to read our diffusion-gradient file. So we eliminated this step by doing the reconstruction for you, and released the FODs. If you would like to display and use our FODs in MRtrix, please read this manual we have prepared and which can be downloaded from the Docs link:
http://www.nitrc.org/docman/view.php/432...
In brief, you will not be able to use our DW data and gradient files in brainsuite (not compatible). But if you can use the reconstructed FODs we have uploaded then you are set.
I hope this helps,
Konstantinos
What we have uploaded is FODs and not diffusion-weighted (DW) data. The reason is that to get to FODs from our DW data you need to be able to read our diffusion gradient file (this is what you are looking for). However, the way we constructed the HARDI template, each voxel has a different diffusion file. This means that users would not be able to use our DW data to reconstruct FODs with any existing software, because none of the existing software would be able to read our diffusion-gradient file. So we eliminated this step by doing the reconstruction for you, and released the FODs. If you would like to display and use our FODs in MRtrix, please read this manual we have prepared and which can be downloaded from the Docs link:
http://www.nitrc.org/docman/view.php/432...
In brief, you will not be able to use our DW data and gradient files in brainsuite (not compatible). But if you can use the reconstructed FODs we have uploaded then you are set.
I hope this helps,
Konstantinos
Threaded View
| Title | Author | Date |
|---|---|---|
| Luca Fornia | Feb 16, 2015 | |
| Konstantinos Arfanakis | Feb 16, 2015 | |
| Luca Fornia | Feb 18, 2015 | |
| Konstantinos Arfanakis | Feb 18, 2015 | |
