Dear Prof Schwarz,


Please can you help me with the script for computing the grey matter volumes for specific regions of interest found in  MCALT atlas. 

I have done the following steps:

1./ Segmented and normalized the images to the MCALT space using the matlab script you provided with the atlas (Thank you very much).

2./ The grey matter probability maps are smoothen using 6mm FWHM gaussian kernel.

3./ I have transformed the MCALT atlas into the native space of the image by using normalization parameters for transforming the image to MCALT space.

Kate