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questions > RE: dcm2niix for Philips PAR/REC files
Aug 26, 2021 05:08 PM | Rubina Chandnani - University of Stuttgart
RE: dcm2niix for Philips PAR/REC files
Hi Chris,
I'm faced with a similar issue.
I downloaded dcm2niix on Ubuntu 20.04 but when I type this command I get this error. Please see below:
dcm2niix -o /mnt/c/Users/rubin/BIDS/sub-R0120062/func -z y /mnt/c/Users/rubin/Documents 2021/Germany/fMRI data/Motor imagery dataset/DICOM/Files/R0120062/source data/func.PAR
Compression will be faster with 'pigz' installed
Chris Rorden's dcm2niiX version v1.0.20181125 (JP2:OpenJPEG) GCC9.3.0 (64-bit Linux)
Warning: only processing last of 6 input files (recompile with 'myEnableMultipleInputs' to recursively process multiple files)
Error: Unable to find any DICOM images in data/func.PAR (or subfolders 5 deep)
I would be so grateful if you could point out what I am doing wrong here or what I need to modify in the command line.
Many thanks for your time in helping me out.
Best,
Rubina
I'm faced with a similar issue.
I downloaded dcm2niix on Ubuntu 20.04 but when I type this command I get this error. Please see below:
dcm2niix -o /mnt/c/Users/rubin/BIDS/sub-R0120062/func -z y /mnt/c/Users/rubin/Documents 2021/Germany/fMRI data/Motor imagery dataset/DICOM/Files/R0120062/source data/func.PAR
Compression will be faster with 'pigz' installed
Chris Rorden's dcm2niiX version v1.0.20181125 (JP2:OpenJPEG) GCC9.3.0 (64-bit Linux)
Warning: only processing last of 6 input files (recompile with 'myEnableMultipleInputs' to recursively process multiple files)
Error: Unable to find any DICOM images in data/func.PAR (or subfolders 5 deep)
I would be so grateful if you could point out what I am doing wrong here or what I need to modify in the command line.
Many thanks for your time in helping me out.
Best,
Rubina
Threaded View
Title | Author | Date |
---|---|---|
Nina Reislev | Jan 26, 2015 | |
ziqing zhao | Dec 6, 2022 | |
Chris Rorden | Dec 6, 2022 | |
ziqing zhao | Dec 6, 2022 | |
Chris Rorden | Dec 6, 2022 | |
Chris Rorden | Jan 26, 2015 | |
Nina Reislev | Jan 27, 2015 | |
Rubina Chandnani | Aug 26, 2021 | |
Chris Rorden | Aug 26, 2021 | |
Rubina Chandnani | Aug 26, 2021 | |
Rubina Chandnani | Aug 27, 2021 | |
Chris Rorden | Aug 27, 2021 | |
Chris Rorden | Jan 27, 2015 | |
Luigi Antelmi | Dec 6, 2016 | |
Chris Rorden | Dec 6, 2016 | |
Shilpi Modi | Jan 3, 2020 | |
Chris Rorden | Jan 3, 2020 | |
Shilpi Modi | Jan 9, 2020 | |
josephine g | Nov 28, 2018 | |
Chris Rorden | Nov 28, 2018 | |
josephine g | Dec 3, 2018 | |
Chris Rorden | Dec 3, 2018 | |
josephine g | Dec 3, 2018 | |
Josh Robinson | Sep 27, 2018 | |
Chris Rorden | Sep 27, 2018 | |