Dear Maarten,

thank you very much for your quick response!
This was already really helpful. The global.1D (as well as csf and wm.1D) are empty (!).
The mc*.D files instead are filled with 389 lines each. I have 400 timepoints and exclude the first 11 by specifying these variables in the batch_list.txt file:

'11 399 400 2.01'

... so my first timepoint is 12 (count starts at 0), the last one is 400 -> so it seems that there is one line extra in the mc*.D files?

If I have 400 volumes in my images, should the entry in batch_lists.txt file e.g. be '0 389 399 TR'?
Or is '0 399 400 TR' correct?

Thanks so much for your support,

Best, Andy