open-discussion
open-discussion > Out of memory during preprocessing
Feb 8, 2012 11:02 AM | Cristina Sole-Padulles
Out of memory during preprocessing
Hi everyone,
I'm Cristina from barcelona. I'mnew at the 'conn comunity'. I'm trying to analyse resting-state with the conn_toolbox (matlab6.5). After having solved some problems linked to the setup process, now I'm stuck at the preprocessing process.
I have included white matter, CSF and realign parameters (rp file derived from realign with SPM) and I have my doubts about the band-pass filter (I put 0.01-0.08). One more thing Do I have to keep the main effect (resting effect) as a confound, as it appears by default? An out of memory error appears but I have enough space.
This error appears:
Error using ==> cat
Out of memory. Type HELP MEMORY for your options.
Error in ==> conn_process at 550
B=cat(2,B,Bb);
Error in ==> conn_process at 12
case 'preprocessing_gui',disp(['CONN: RUNNING PREPROCESSING STEP']); conn_process([6:8],varargin{:});
Error in ==> conn at 1071
conn_process('preprocessing_gui');
Error in ==> conn_menumanager at 112
feval(MM.MENU{n0}.callback{n1}{1},MM.MENU{n0}.callback{n1}{2:end});
??? Error using ==> conn_menumanager('cursorup');
Error using ==> cat
Out of memory. Type HELP MEMORY for your options.
??? Error using ==> drawnow
Error while evaluating figure WindowButtonUpFcn
Can you help me? Thank you!
Cristina
I'm Cristina from barcelona. I'mnew at the 'conn comunity'. I'm trying to analyse resting-state with the conn_toolbox (matlab6.5). After having solved some problems linked to the setup process, now I'm stuck at the preprocessing process.
I have included white matter, CSF and realign parameters (rp file derived from realign with SPM) and I have my doubts about the band-pass filter (I put 0.01-0.08). One more thing Do I have to keep the main effect (resting effect) as a confound, as it appears by default? An out of memory error appears but I have enough space.
This error appears:
Error using ==> cat
Out of memory. Type HELP MEMORY for your options.
Error in ==> conn_process at 550
B=cat(2,B,Bb);
Error in ==> conn_process at 12
case 'preprocessing_gui',disp(['CONN: RUNNING PREPROCESSING STEP']); conn_process([6:8],varargin{:});
Error in ==> conn at 1071
conn_process('preprocessing_gui');
Error in ==> conn_menumanager at 112
feval(MM.MENU{n0}.callback{n1}{1},MM.MENU{n0}.callback{n1}{2:end});
??? Error using ==> conn_menumanager('cursorup');
Error using ==> cat
Out of memory. Type HELP MEMORY for your options.
??? Error using ==> drawnow
Error while evaluating figure WindowButtonUpFcn
Can you help me? Thank you!
Cristina
Threaded View
| Title | Author | Date |
|---|---|---|
| Cristina Sole-Padulles | Feb 8, 2012 | |
| Alfonso Nieto-Castanon | Feb 11, 2012 | |
| Cristina Sole-Padulles | Feb 13, 2012 | |
| Cristina Sole-Padulles | Feb 13, 2012 | |
| Alfonso Nieto-Castanon | Feb 15, 2012 | |
| Cristina Sole-Padulles | Feb 23, 2012 | |
| Cristina Sole-Padulles | Feb 16, 2012 | |
| Alfonso Nieto-Castanon | Feb 18, 2012 | |
| Riccardo Biffi | Feb 8, 2012 | |
| Cristina Sole-Padulles | Feb 9, 2012 | |
| Ming-Ru Chuang | Feb 10, 2012 | |
| mehdi yousefi | Feb 10, 2012 | |
