AHEAD

Automatic Hippocampal Estimator using Atlas-based Delineation (AHEAD) is an open-source turnkey software for automatic hippocampus segmentation. Its primary use is for delineating hippocampus in T1-weighted MRI images. AHEAD is developed by Jung W. Suh, Hongzhi Wang, Sandhitsu Das, Brian Avants, Philip Cook, John Pluta and Paul Yushkevich, and colleagues at the Penn Image Computing and Science Laboratory (PICSL) at the University of Pennsylvania.
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Specifications

Category:Volume Measurement, Anatomic
License:GNU General Public License (GPL), FSL License
Development Status:3 - Alpha
Diagnosis:Dementia, Epilepsy, Schizophrenia
Domain:MR
Environment:Console (Text Based)
Intended Audience:Developers, End Users
Natural Language:English
Operating System:Cygwin, Linux
Programming Language:C++, sh/bash
Supported Data Format:NIfTI-1

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PubMed Mentions documentation

Three-dimensional hippocampal MR morphometry with high-dimensional transformation of a neuroanatomic atlas. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

Selective COX-2 inhibition prevents progressive dopamine neuron degeneration in a rat model of Parkinson's disease. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

Cerebral cortical processing of swallowing in older adults. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

A unified approach for morphometric and functional data analysis in young, old, and demented adults using automated atlas-based head size normalization: reliability and validation against manual measurement of total intracranial volume. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

Feasibility of multi-site clinical structural neuroimaging studies of aging using legacy data. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

A unified framework for MR based disease classification. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

On the estimation of the location of the hippocampus in the context of hippocampal avoidance whole brain radiotherapy treatment planning. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

Volume estimation of the thalamus using freesurfer and stereology: consistency between methods. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

aBEAT: a toolbox for consistent analysis of longitudinal adult brain MRI. posted by Nina Preuss on Dec 16, 2017

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PubMed Mentions documentation

Classification and lateralization of temporal lobe epilepsies with and without hippocampal atrophy based on whole-brain automatic MRI segmentation. posted by Nina Preuss on Dec 16, 2017