ENIGMA-DTI pipeline

The ENIGMA DTI pipeline provides tools to extract whole-brain average and regional measurements from DTI images including FA, AD, RD and MD. The pipeline has been used successfully across sites worldwide and shown to extract reliable and heritable measures from diffusion imaging. We provide a FA-template created from multiple high resolution datasets to better accommodate registrations to a standard atlas than current existing tools. The ENIGMA-DTI analysis team is continuously working to bridge together pipelines to analyze DTI in reliable ways across multiple datasets and reduce inter-site inhomogeneities and inconsistencies between findings, so stay tuned for more updates and tools. Successful global studies of genetic or disease effects underlying variability in white matter neuroanatomy have been published through ENIGMA and many more are underway. To get involved in any ENIGMA group send us a message -- enigma@ini.usc.edu or support.enigmaDTI@ini.usc.edu.
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Specifications

License:Public Domain
Domain:Imaging Genomics
Other Keywords: diffusion, dti, imaging genetics

Associations

has subpart:FSL
works well with:Solar Eclipse Imaging Genetics tools

Recent Activity

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File Activity

enigma_dti: ENIGMA DTI ROI extraction protocol release

ROI extraction protocol posted by Peter Kochunov on Jan 14, 2016

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ENIGMA-DTI diffusivity protocol: ENIGMA DTI diffusivity protocol  release

diffusivity protocol posted by Peter Kochunov on Jan 14, 2016

Forum Activity

help forum

RE: Enigma DTI protocols work for MD image? posted by Peter Kochunov on Jan 14, 2016

Forum Activity

help forum

Enigma DTI protocols work for MD image? posted by Chao Huang on Nov 24, 2015

File Activity

enigma_dti: ENIGMA-DTI FA Original Template  release

enigmaDTI.zip posted by Neda Jahanshad on Nov 11, 2015

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enigma_dti: ENIGMA GitHub release

ENIGMA-git (GitHub page) posted by Neda Jahanshad on Nov 11, 2015

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enigma_dti: ENIGMA-DTI FA protocols 2015.11.11.v1.1 release

ALL_ENIGMA_DTI_Protocols.docx posted by Neda Jahanshad on Nov 11, 2015

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enigma_dti: ENIGMA-DTI FA protocols 2015.11.11.v1.1 release

ENIGMA-DTI protocols page posted by Neda Jahanshad on Nov 11, 2015

Document Activity

Main Folder documentation

ENIGMA DTI processing - version 1.1 posted by Neda Jahanshad on Nov 11, 2015

Document Activity

Main Folder documentation

ENIGMA-Git on GitHub posted by Neda Jahanshad on Oct 21, 2015