Solar Eclipse Imaging Genetics tools

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We are developing software tools optimized for performing univariate and multivariate imaging genetics analyses while providing practical correction strategies for multiple testing.

Official beta SOLAR Eclipse Version 8.3.X, adds multiple developments. This includes: Empirical pedigree from plink files, fast heritability (FPHI) and GWAS (NINGA) updates for CPU/GPU computing, more accurate p-value approximation for fast inference, polyclass_normalize function for multi-site homogenization and mega-analysis.

Upcoming implements: CPU/GPU-based voxel-wise GWA using new HDF5 file format and cluster based statistical inference based on permutations.

Source codes are distributed as a tarball or at github.com/kochunov/solar-eclipse

The changes are described at http://solar-eclipse-genetics.org/

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Specifications

Category:
Genetic Association
Diagnosis:
Bipolar Disorder, Alzheimer Disease, Epilepsy, Schizophrenia

Associations

is installed on:
NITRC Computational Environment (NITRC-CE)
works well with:
BrainVISA
ENIGMA-DTI pipeline
ENIGMA resting state fMRI processing pipeline

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NeuroLex ID: nlx_155966

RRID: SCR_009645

Funding: NIH-NIBIB R01 EB015611 01

Documents: 18

Forums: 21 messages in 2 forums

News Items: 5

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Total Downloads: 26902

Registered: Dec 29, 2011

Organization: University of Maryland and Texas Biomedical Foundation

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