Solar Eclipse Imaging Genetics tools

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We are developing software tools optimized for performing univariate and multivariate imaging genetics analyses while providing practical correction strategies for multiple testing.

Official beta SOLAR Eclipse Version 8.3.X, adds multiple developments. This includes: Empirical pedigree from plink files, fast heritability (FPHI) and GWAS (NINGA) updates for CPU/GPU computing, more accurate p-value approximation for fast inference, polyclass_normalize function for multi-site homogenization and mega-analysis.

Upcoming implements: CPU/GPU-based voxel-wise GWA using new HDF5 file format and cluster based statistical inference based on permutations.

Source codes are distributed as a tarball or at github.com/kochunov/solar-eclipse

The changes are described at http://solar-eclipse-genetics.org/

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Specifications

Category:
Genetic Association
License:
GPL-Style Open Source
Diagnosis:
Bipolar Disorder, Alzheimer Disease, Epilepsy, Schizophrenia
Domain:
Imaging Genomics
Operating System:
MacOS, Windows XP, Linux
Pipelines and Workflows Supported:
LONI Pipeline
Programming Language:
C++
Supported Data Format:
GIfTI, NIfTI-1

Associations

is installed on:
NITRC Computational Environment (NITRC-CE)
works well with:
BrainVISA
ENIGMA-DTI pipeline
ENIGMA resting state fMRI processing pipeline

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Home Page

NeuroLex ID: nlx_155966

RRID: SCR_009645

Funding: NIH-NIBIB R01 EB015611 01

Documents: 22

Forums: 12 messages in 2 forums

Mailing Lists: 1

News Items: 4

Task Manager: 0 open / 0 total

Tracker: 1 open / 1 total

Total Downloads: 18941

Registered: Dec 29, 2011

Organization: University of Maryland and Texas Biomedical Foundation

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