FSL

FSL is a comprehensive library of image analysis and statistical tools for FMRI, MRI and DTI brain imaging data. FSL is written mainly by members of the Analysis Group, FMRIB, Oxford, UK.

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Associations

is part of:

NeuroDebian
HCP WU-Minn Consortium

is from the makers of:

HCP WU-Minn Consortium

is installed on:

NITRC Computational Environment (NITRC-CE)

is required to build:

Rodent Brain Extraction Tool

is required to run:

BrainSolution
BrainParser
PANDA: a pipeline tool for diffusion MRI
SOCK
Corpus Callosum Thickness Profile Analysis Pipeline

works well with:

FreeSurfer
Center for Computational Biology (CCB)
HCP Harvard/MGH-UCLA
NIPY Pipeline and Interfaces
PyMVPA
MRIcron
CANDI Neuroimaging Access Point
TractoR: Tractography with R
REST: a toolkit for resting-state fMRI
Laboratory of Neuro Imaging (LONI)
Neuroimaging Made Easy Blog
Signed Differential Mapping
NIDB - Neuroinformatics Database
NCANDA: Data Integration Component
DTI-TK
IIT Human Brain Atlas (v.4.1)
MRIcroGL
MRIcroS

Tool & Resource news

2015 FSL Course: 8-12 June, Waikiki Beach, Hawaii, USA posted by Mark Jenkinson on Feb 20, 2015

FSL Tools documentation

TBSS Documentation posted by David Kennedy on Jul 2, 2013

FSL Tools documentation

SUSAN Documentation posted by David Kennedy on Jul 2, 2013

FSL Tools documentation

SIENA Documentation posted by David Kennedy on Jul 2, 2013

FSL Tools documentation

FUGUE Documentation posted by David Kennedy on Jul 2, 2013

FSL Tools documentation

FSL View Documentation posted by David Kennedy on Jul 2, 2013

FSL Tools documentation

FLIRT Documentation posted by David Kennedy on Jul 2, 2013

FSL Tools documentation

FDT Documentation posted by David Kennedy on Jul 2, 2013

FSL Tools documentation

FAST Documentation posted by David Kennedy on Jul 2, 2013

FSL Tools documentation

BET & BET2 Documentation posted by David Kennedy on Jul 2, 2013

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FSL

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Associations

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