Nutil - Neuroimaging utilities
Nutil simplifies and streamlines the pre-and-post processing of 2D brain image data from mouse and rat. Nutil is developed as a stand-alone application and requires no experience to execute. The user specifies the input and output parameters in the GUI.
1. TiffCreator: convert JPEG, PNG and normal TIFF images to tiled TIFF format.
2. Transform: rename, rotate and resize extremely large tiled TIFF images.
3. Resize: for resizing JPEG/PNG images with output in PNG format.
4. Quantifier: for the batch extraction, quantification and spatial analysis of labelling in histological section images from mouse or rat brain. The spatial analysis is based on a reference atlas such as the Allen Mouse Brain reference atlas or the Waxholm Space Atlas of the Sprague Dawley rat brain.
For user support: firstname.lastname@example.org
Report issues: https://github.com/Neural-Systems-at-UIO...
Recent Activity - Forums
RE: QUINT Workflow Report Not Counting some Pixels posted by Sharon Christine Yates on Oct 1, 2021
RE: Using density counting data generated by Ilatsik as an input for Nutil posted by Anh Nguyen on Aug 23, 2021
Using density counting data generated by Ilatsik as an input for Nutil posted by Anh Nguyen on Aug 20, 2021
RE: Getting original vs. transformed cell coordinats posted by Sharon Christine Yates on Aug 21, 2020