Nutil - Neuroimaging utilities
Nutil simplifies and streamlines the pre-and-post processing of 2D brain image data from mouse and rat. Nutil is developed as a stand-alone application and requires no experience to execute. The user specifies the input and output parameters in the GUI.
Nutil enables:
1. TiffCreator: convert JPEG, PNG and normal TIFF images to tiled TIFF format.
2. Transform: rename, rotate and resize extremely large tiled TIFF images.
3. Resize: for resizing JPEG/PNG images with output in PNG format.
4. Quantifier: for the batch extraction, quantification and spatial analysis of labelling in histological section images from mouse or rat brain. The spatial analysis is based on a reference atlas such as the Allen Mouse Brain reference atlas or the Waxholm Space Atlas of the Sprague Dawley rat brain.
For user support: support@ebrains.eu
Report issues: https://github.com/Neural-Systems-at-UIO...
Execution Options
Specifications
Recent Activity - Forums
RE: QUINT Workflow Report Not Counting some Pixels posted by busra on Jun 30
Customized Quantification for left vs. right hemisohere posted by Ying Han on Jan 12
RE: QUINT Workflow Report Not Counting some Pixels posted by busra on Dec 28, 2023
Nutil Region Area posted by busra on Dec 9, 2023
RE: Combine point cloud coordinates into 1 JSON file posted by Britt van de Gevel on Jul 5, 2023
RE: Combine point cloud coordinates into 1 JSON file posted by Gergely Csucs on Jul 5, 2023
Combine point cloud coordinates into 1 JSON file posted by Britt van de Gevel on Jul 5, 2023
Recent Activity - Files
nutil: 8.0.1 Macos M1 ARM release
nutil_0.8.1.dmg posted by Nicolaas Groeneboom on Jan 23, 2023
nutil_win_v0.8.0.zip posted by Sharon Christine Yates on Jul 1, 2022
nutil_win_v0.7.0.zip posted by Sharon Christine Yates on Oct 11, 2021
nutil_win_v0.6.0.zip posted by Sharon Christine Yates on Feb 26, 2021
nutil_win_v0.5.0.zip posted by Sharon Christine Yates on Feb 12, 2021
Nutil_v404.zip posted by Sharon Christine Yates on Oct 2, 2020
Nutil_v403.zip posted by Sharon Christine Yates on Jun 19, 2020
Nutil_v0402.zip posted by Sharon Christine Yates on Apr 5, 2020
nutil_401.zip posted by Sharon Christine Yates on Feb 14, 2020
nutil_0.4.zip posted by Sharon Christine Yates on Jan 31, 2020