License: 
The Waxholm Space atlas of the Sprague Dawley rat brain is licensed under a Creative Commons Attribution (CC BY) 4.0 license: https://creativecommons.org/licenses/by-sa/4.0/

Citation policy:
Please refer to the atlas by RRID:
SCR_017124, and cite the first publication (Papp et al., 2014) along with the publication for the atlas version(s) you have used (see below). We further encourage users to:

  • Also cite version 2, Kjonigsen et al. (2015) if their work makes particular use of delineations of the hippocampal region
  • Also cite version 3, Osen et al. (2019) if their work makes particular use of delineations of the auditory system
  • Also cite version 4, Kleven et al. (2023) if their work makes particular use of delineations of the basal ganglia, thalamus or cortical structures
  • Abbreviate the atlas WHS rat brain atlas v1, v1.01, v2, v3, or v4
 

Publications:

WHS rat brain atlas v1 (Papp et al., 2014)
Papp EA, Leergaard TB, Calabrese E, Johnson GA, Bjaalie JG (2014) Waxholm Space atlas of the Sprague Dawley rat brain. NeuroImage 97, 374-386. DOI: 10.1016/j.neuroimage.2014.04.001


WHS rat brain atlas v1.01 (Papp et al., 2015)
Papp EA, Leergaard TB, Calabrese E, Johnson GA, Bjaalie JG (2015) Addendum to "Waxholm Space atlas of the Sprague Dawley rat brain" [NeuroImage 97 (2014) 374-386]. NeuroImage 105, 561–562. DOI: 10.1016/j.neuroimage.2014.10.017


WHS rat brain atlas v2 (Kjonigsen et al., 2015)
Kjonigsen LJ, Lillehaug S, Bjaalie JG, Witter MP, Leergaard TB (2015) Waxholm Space atlas of the rat brain hippocampal region: Three-dimensional delineations based on magnetic resonance and diffusion tensor imaging. NeuroImage 108, 441-449. DOI: 10.1016/j.neuroimage.2014.12.080


WHS rat brain atlas v3 (Osen et al., 2019)
Osen KK, Imad J, Wennberg AE, Papp EA, Leergaard TB (2019) Waxholm Space atlas of the rat brain auditory system: Three-dimensional delineations based on structural and diffusion tensor magnetic resonance imaging. NeuroImage 199, 38-56. DOI: 10.1016/j.neuroimage.2019.05.016


WHS rat brain atlas v4 (Kleven et al., 2023)
Kleven, H., Bjerke, I.E., Clascá, F. et al. Waxholm Space atlas of the rat brain: a 3D atlas supporting data analysis and integration. Nat Methods 20, 1822–1829 (2023). DOI: 10.1038/s41592-023-02034-3