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[Evaluation of the alternative approach to complement activation using C3-dependent adhesion].
Description: Maianskii, A N, et al. [Evaluation of the alternative approach to complement activation using C3-dependent adhesion]. ''Lab Delo''. 1991; 41-4
Updated: Dec 16, 2017
The reliability and validity of a measure of perceived functional capacity for work in chronic back pain.
Description: Gibson, L, et al. The reliability and validity of a measure of perceived functional capacity for work in chronic back pain. ''J Occup Rehabil''. 1996 Sep; '''6''' (3):159-75
Updated: Dec 16, 2017
Relationships among age, body weight, resting heart rate, and performance in a new test of lift capacity.
Description: Matheson, L N. Relationships among age, body weight, resting heart rate, and performance in a new test of lift capacity. ''J Occup Rehabil''. 1996 Dec; '''6''' (4):225-37
Updated: Dec 16, 2017
Dynamic changes in sarcoplasmic reticulum function in cardiac hypertrophy and failure.
Description: Szymanska, G, et al. Dynamic changes in sarcoplasmic reticulum function in cardiac hypertrophy and failure. ''Pflugers Arch''. 2000 Jan; '''439''' (3):339-48
Updated: Dec 16, 2017
Haploinsufficiency of protamine-1 or -2 causes infertility in mice.
Description: Cho, C, et al. Haploinsufficiency of protamine-1 or -2 causes infertility in mice. ''Nat Genet''. 2001 May; '''28''' (1):82-6
Updated: Dec 16, 2017
The continuous monitoring of field water samples with a novel multi-channel two-stage mini-bioreactor system.
Description: Gu, M B, et al. The continuous monitoring of field water samples with a novel multi-channel two-stage mini-bioreactor system. ''Environ Monit Assess''. 2001 Jul; '''70''' (1-2):71-81
Updated: Dec 16, 2017
Monitoring the denitrification of wastewater containing high concentrations of nitrate with methanol in a sulfur-packed reactor.
Description: Kim, I S, et al. Monitoring the denitrification of wastewater containing high concentrations of nitrate with methanol in a sulfur-packed reactor. ''Appl Microbiol Biotechnol''. 2002 Jun; '''59''' (1):91-6
Updated: Dec 16, 2017
Hyaluronic acid and silver sulfadiazine-impregnated polyurethane foams for wound dressing application.
Description: Cho, Y-S, et al. Hyaluronic acid and silver sulfadiazine-impregnated polyurethane foams for wound dressing application. ''J Mater Sci Mater Med''. 2002 Sep; '''13''' (9):861-5
Updated: Dec 16, 2017
Monitoring the impact of dissolved oxygen and nitrite on anoxic biofilm in continuous denitrification process.
Description: Jang, Am, et al. Monitoring the impact of dissolved oxygen and nitrite on anoxic biofilm in continuous denitrification process. ''Environ Monit Assess''. 2003 Sep; '''87''' (2):133-44
Updated: Dec 16, 2017
Gamma-radiation dose-rate effects on DNA damage and toxicity in bacterial cells.
Description: Min, Jiho, et al. Gamma-radiation dose-rate effects on DNA damage and toxicity in bacterial cells. ''Radiat Environ Biophys''. 2003 Oct; '''42''' (3):189-92
Updated: Dec 16, 2017
Construct validity of a kinesiophysical functional capacity evaluation administered within a worker's compensation environment.
Description: Gross, Douglas P, et al. Construct validity of a kinesiophysical functional capacity evaluation administered within a worker's compensation environment. ''J Occup Rehabil''. 2003 Dec; '''13''' (4):287-95
Updated: Dec 16, 2017
Bioconductor: open software development for computational biology and bioinformatics.
Description: Gentleman, Robert C, et al. Bioconductor: open software development for computational biology and bioinformatics. ''Genome Biol''. 2004; '''5''' (10):R80
Updated: Dec 16, 2017
Pesticide induced toxicity and stress response in bacterial cells.
Description: Pham, C H, et al. Pesticide induced toxicity and stress response in bacterial cells. ''Bull Environ Contam Toxicol''. 2004 Feb; '''72''' (2):380-6
Updated: Dec 16, 2017
Study on size distribution of total aerosol and water-soluble ions during an Asian dust storm event at Jeju Island, Korea.
Description: Park, S H, et al. Study on size distribution of total aerosol and water-soluble ions during an Asian dust storm event at Jeju Island, Korea. ''Environ Monit Assess''. 2004 Apr-May; '''93''' (1-3):157-83
Updated: Dec 16, 2017
Identification of CED-3 substrates by a yeast-based screening method.
Description: Kim, Sung Yun, et al. Identification of CED-3 substrates by a yeast-based screening method. ''Mol Biotechnol''. 2004 May; '''27''' (1):1-6
Updated: Dec 16, 2017
Combined effects of pH and biosurfactant addition on solubilization and biodegradation of phenanthrene.
Description: Shin, K-H, et al. Combined effects of pH and biosurfactant addition on solubilization and biodegradation of phenanthrene. ''Appl Microbiol Biotechnol''. 2004 Aug; '''65''' (3):336-43
Updated: Dec 16, 2017
The zinc finger transcription factor Egr-1 is upregulated in arsenite-treated human keratinocytes.
Description: Al-Sarraj, Alia, et al. The zinc finger transcription factor Egr-1 is upregulated in arsenite-treated human keratinocytes. ''J Mol Med (Berl)''. 2004 Aug; '''82''' (8):530-8
Updated: Dec 16, 2017
Removal of arsenic in tailings by soil flushing and the remediation process monitoring.
Description: Lee, Sang-Woo, et al. Removal of arsenic in tailings by soil flushing and the remediation process monitoring. ''Environ Geochem Health''. 2004 Dec; '''26''' (4):403-9
Updated: Dec 16, 2017
The Molecular Biology Toolkit (MBT): a modular platform for developing molecular visualization applications.
Description: Moreland, John L, et al. The Molecular Biology Toolkit (MBT): a modular platform for developing molecular visualization applications. ''BMC Bioinformatics''. 2005 Feb 6; '''6''': 21
Updated: Dec 16, 2017
Providing visualisation support for the analysis of anatomy ontology data.
Description: Dadzie, Aba-Sah, et al. Providing visualisation support for the analysis of anatomy ontology data. ''BMC Bioinformatics''. 2005 Mar 24; '''6''': 74
Updated: Dec 16, 2017
MARS: microarray analysis, retrieval, and storage system.
Description: Maurer, Michael, et al. MARS: microarray analysis, retrieval, and storage system. ''BMC Bioinformatics''. 2005 Apr 18; '''6''': 101
Updated: Dec 16, 2017
Simultaneous measurements of atmospheric pollutants and visibility with a Long-Path DOAS system in urban areas.
Description: Lee, Jeong Soon, et al. Simultaneous measurements of atmospheric pollutants and visibility with a Long-Path DOAS system in urban areas. ''Environ Monit Assess''. 2005 May; '''104''' (1-3):281-93
Updated: Dec 16, 2017
Software solutions.
Description: Wilson, Greg. Software solutions. ''Nature''. 2005 Jul 28; '''436''' (7050):600
Updated: Dec 16, 2017
Seasonal variation of chemical composition in fine particles at Gosan, Korea.
Description: Han, J S, et al. Seasonal variation of chemical composition in fine particles at Gosan, Korea. ''Environ Monit Assess''. 2005 Aug; '''107''' (1-3):221-37
Updated: Dec 16, 2017
Basis for an FCE methodology for patients with work-related upper limb disorders.
Description: Reneman, M F, et al. Basis for an FCE methodology for patients with work-related upper limb disorders. ''J Occup Rehabil''. 2005 Sep; '''15''' (3):353-63
Updated: Dec 16, 2017
On the way to building an integrated computational environment for the study of developmental patterns and genetic diseases.
Description: Turinsky, Andrei L, et al. On the way to building an integrated computational environment for the study of developmental patterns and genetic diseases. ''Int J Nanomedicine''. 2006; '''1''' (1):89-96
Updated: Dec 16, 2017
VANTED: a system for advanced data analysis and visualization in the context of biological networks.
Description: Junker, Bjorn H, et al. VANTED: a system for advanced data analysis and visualization in the context of biological networks. ''BMC Bioinformatics''. 2006 Mar 6; '''7''': 109
Updated: Dec 16, 2017
Virtual parameter-estimation experiments in Bioprocess-Engineering education.
Description: Sessink, Olivier D T, et al. Virtual parameter-estimation experiments in Bioprocess-Engineering education. ''Bioprocess Biosyst Eng''. 2006 May; '''28''' (6):379-86
Updated: Dec 16, 2017
A Fisheye Viewer for microarray-based gene expression data.
Description: Wu, Min, et al. A Fisheye Viewer for microarray-based gene expression data. ''BMC Bioinformatics''. 2006 Oct 13; '''7''': 452
Updated: Dec 16, 2017
A comparison of two lifting assessment approaches in patients with chronic low back pain.
Description: Soer, Remko, et al. A comparison of two lifting assessment approaches in patients with chronic low back pain. ''J Occup Rehabil''. 2006 Dec; '''16''' (4):639-46
Updated: Dec 16, 2017
Reinventing yourself: marketing the experienced chemist in today's job market.
Description: Fetzer, John. Reinventing yourself: marketing the experienced chemist in today's job market. ''Anal Bioanal Chem''. 2007 Feb; '''387''' (3):727-8
Updated: Dec 16, 2017
The Basic Immune Simulator: an agent-based model to study the interactions between innate and adaptive immunity.
Description: Folcik, Virginia A, et al. The Basic Immune Simulator: an agent-based model to study the interactions between innate and adaptive immunity. ''Theor Biol Med Model''. 2007 Sep 27; '''4''': 39
Updated: Dec 16, 2017
MindSeer: a portable and extensible tool for visualization of structural and functional neuroimaging data.
Description: Moore, Eider B, et al. MindSeer: a portable and extensible tool for visualization of structural and functional neuroimaging data. ''BMC Bioinformatics''. 2007 Oct 15; '''8''': 389
Updated: Dec 16, 2017
Open source in imaging informatics.
Description: Nagy, Paul. Open source in imaging informatics. ''J Digit Imaging''. 2007 Nov; '''20 Suppl 1''': 1-10
Updated: Dec 16, 2017
The image-guided surgery toolkit IGSTK: an open source C++ software toolkit.
Description: Enquobahrie, Andinet, et al. The image-guided surgery toolkit IGSTK: an open source C++ software toolkit. ''J Digit Imaging''. 2007 Nov; '''20 Suppl 1''': 21-33
Updated: Dec 16, 2017
Fine mapping of regulatory loci for mammalian gene expression using radiation hybrids.
Description: Park, Christopher C, et al. Fine mapping of regulatory loci for mammalian gene expression using radiation hybrids. ''Nat Genet''. 2008 Apr; '''40''' (4):421-9
Updated: Dec 16, 2017
The development and deployment of Common Data Elements for tissue banks for translational research in cancer - an emerging standard based approach for the Mesothelioma Virtual Tissue Bank.
Description: Mohanty, Sambit K, et al. The development and deployment of Common Data Elements for tissue banks for translational research in cancer - an emerging standard based approach for the Mesothelioma Virtual Tissue Bank. ''BMC Cancer''. 2008 Apr 8; '''8''': 91
Updated: Dec 16, 2017
The MERG Suite: Tools for discovering competencies and associated learning resources.
Description: Bhupatiraju, Ravi Teja, et al. The MERG Suite: Tools for discovering competencies and associated learning resources. ''Source Code Biol Med''. 2008 May 14; '''3''': 7
Updated: Dec 16, 2017
Hiring discrimination against people with disabilities under the ADA: characteristics of charging parties.
Description: McMahon, Brian T, et al. Hiring discrimination against people with disabilities under the ADA: characteristics of charging parties. ''J Occup Rehabil''. 2008 Jun; '''18''' (2):122-32
Updated: Dec 16, 2017
Bioimage informatics: a new area of engineering biology.
Description: Peng, Hanchuan. Bioimage informatics: a new area of engineering biology. ''Bioinformatics''. 2008 Sep 1; '''24''' (17):1827-36
Updated: Dec 16, 2017
Conflict and user involvement in drug misuse treatment decision-making: a qualitative study.
Description: Fischer, Jan, et al. Conflict and user involvement in drug misuse treatment decision-making: a qualitative study. ''Subst Abuse Treat Prev Policy''. 2008 Oct 6; '''3''': 21
Updated: Dec 16, 2017
Identifying data sharing in biomedical literature.
Description: Piwowar, Heather A, et al. Identifying data sharing in biomedical literature. ''AMIA Annu Symp Proc''. 2008 Nov 6; 596-600
Updated: Dec 16, 2017
Changes in the reproductive function and developmental phenotypes in mice following intramuscular injection of an activin betaA-expressing plasmid.
Description: Kim, Mi-Nyeu, et al. Changes in the reproductive function and developmental phenotypes in mice following intramuscular injection of an activin betaA-expressing plasmid. ''Reprod Biol Endocrinol''. 2008 Dec 16; '''6''': 63
Updated: Dec 16, 2017
Is searching full text more effective than searching abstracts?
Description: Lin, Jimmy. Is searching full text more effective than searching abstracts? ''BMC Bioinformatics''. 2009 Feb 3; '''10''': 46
Updated: Dec 16, 2017
KinImmerse: Macromolecular VR for NMR ensembles.
Description: Block, Jeremy N, et al. KinImmerse: Macromolecular VR for NMR ensembles. ''Source Code Biol Med''. 2009 Feb 17; '''4''': 3
Updated: Dec 16, 2017
A bioinformatics knowledge discovery in text application for grid computing.
Description: Castellano, Marcello, et al. A bioinformatics knowledge discovery in text application for grid computing. ''BMC Bioinformatics''. 2009 Jun 16; '''10 Suppl 6''': S23
Updated: Dec 16, 2017
Visualising biological data: a semantic approach to tool and database integration.
Description: Pettifer, Steve, et al. Visualising biological data: a semantic approach to tool and database integration. ''BMC Bioinformatics''. 2009 Jun 16; '''10 Suppl 6''': S19
Updated: Dec 16, 2017
Sector and Sphere: the design and implementation of a high-performance data cloud.
Description: Gu, Yunhong, et al. Sector and Sphere: the design and implementation of a high-performance data cloud. ''Philos Trans A Math Phys Eng Sci''. 2009 Jun 28; '''367''' (1897):2429-45
Updated: Dec 16, 2017
UTGB toolkit for personalized genome browsers.
Description: Saito, Taro L, et al. UTGB toolkit for personalized genome browsers. ''Bioinformatics''. 2009 Aug 1; '''25''' (15):1856-61
Updated: Dec 16, 2017
Genoviz Software Development Kit: Java tool kit for building genomics visualization applications.
Description: Helt, Gregg A, et al. Genoviz Software Development Kit: Java tool kit for building genomics visualization applications. ''BMC Bioinformatics''. 2009 Aug 25; '''10''': 266
Updated: Dec 16, 2017
A journey to Semantic Web query federation in the life sciences.
Description: Cheung, Kei-Hoi, et al. A journey to Semantic Web query federation in the life sciences. ''BMC Bioinformatics''. 2009 Oct 1; '''10 Suppl 10''': S10
Updated: Dec 16, 2017
NeuronBank: A Tool for Cataloging Neuronal Circuitry.
Description: Katz, Paul S, et al. NeuronBank: A Tool for Cataloging Neuronal Circuitry. ''Front Syst Neurosci''. 2010; '''4''': 9
Updated: Dec 16, 2017
A reference guide for tree analysis and visualization.
Description: Pavlopoulos, Georgios A, et al. A reference guide for tree analysis and visualization. ''BioData Min''. 2010 Feb 22; '''3''' (1):1
Updated: Dec 16, 2017
Visualization of image data from cells to organisms.
Description: Walter, Thomas, et al. Visualization of image data from cells to organisms. ''Nat Methods''. 2010 Mar; '''7''' (3 Suppl):S26-41
Updated: Dec 16, 2017
Visualizing genomes: techniques and challenges.
Description: Nielsen, Cydney B, et al. Visualizing genomes: techniques and challenges. ''Nat Methods''. 2010 Mar; '''7''' (3 Suppl):S5-S15
Updated: Dec 16, 2017
Introducing W.A.T.E.R.S.: a workflow for the alignment, taxonomy, and ecology of ribosomal sequences.
Description: Hartman, Amber L, et al. Introducing W.A.T.E.R.S.: a workflow for the alignment, taxonomy, and ecology of ribosomal sequences. ''BMC Bioinformatics''. 2010 Jun 12; '''11''': 317
Updated: Dec 16, 2017
CONAN: copy number variation analysis software for genome-wide association studies.
Description: Forer, Lukas, et al. CONAN: copy number variation analysis software for genome-wide association studies. ''BMC Bioinformatics''. 2010 Jun 14; '''11''': 318
Updated: Dec 16, 2017
MagicViewer: integrated solution for next-generation sequencing data visualization and genetic variation detection and annotation.
Description: Hou, Huabin, et al. MagicViewer: integrated solution for next-generation sequencing data visualization and genetic variation detection and annotation. ''Nucleic Acids Res''. 2010 Jul; '''38''' (Web Server issue):W732-6
Updated: Dec 16, 2017
The Ontology Lookup Service: bigger and better.
Description: Cote, Richard, et al. The Ontology Lookup Service: bigger and better. ''Nucleic Acids Res''. 2010 Jul; '''38''' (Web Server issue):W155-60
Updated: Dec 16, 2017
OpenChrom: a cross-platform open source software for the mass spectrometric analysis of chromatographic data.
Description: Wenig, Philip, et al. OpenChrom: a cross-platform open source software for the mass spectrometric analysis of chromatographic data. ''BMC Bioinformatics''. 2010 Jul 30; '''11''': 405
Updated: Dec 16, 2017
IHE cross-enterprise document sharing for imaging: interoperability testing software.
Description: Noumeir, Rita, et al. IHE cross-enterprise document sharing for imaging: interoperability testing software. ''Source Code Biol Med''. 2010 Sep 21; '''5''': 9
Updated: Dec 16, 2017
BioRuby: bioinformatics software for the Ruby programming language.
Description: Goto, Naohisa, et al. BioRuby: bioinformatics software for the Ruby programming language. ''Bioinformatics''. 2010 Oct 15; '''26''' (20):2617-9
Updated: Dec 16, 2017
TogoDoc server/client system: smart recommendation and efficient management of life science literature.
Description: Iwasaki, Wataru, et al. TogoDoc server/client system: smart recommendation and efficient management of life science literature. ''PLoS One''. 2010 Dec 13; '''5''' (12):e15305
Updated: Dec 16, 2017
COINS: An Innovative Informatics and Neuroimaging Tool Suite Built for Large Heterogeneous Datasets.
Description: Scott, Adam, et al. COINS: An Innovative Informatics and Neuroimaging Tool Suite Built for Large Heterogeneous Datasets. ''Front Neuroinform''. 2011; '''5''': 33
Updated: Dec 16, 2017
Data hosting infrastructure for primary biodiversity data.
Description: Goddard, Anthony, et al. Data hosting infrastructure for primary biodiversity data. ''BMC Bioinformatics''. 2011; '''12 Suppl 15''': S5
Updated: Dec 16, 2017
Data ontology and an information system realization for web-based management of image measurements.
Description: Prodanov, Dimiter. Data ontology and an information system realization for web-based management of image measurements. ''Front Neuroinform''. 2011; '''5''': 25
Updated: Dec 16, 2017
HIVToolbox, an integrated web application for investigating HIV.
Description: Sargeant, David, et al. HIVToolbox, an integrated web application for investigating HIV. ''PLoS One''. 2011; '''6''' (5):e20122
Updated: Dec 16, 2017
Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python.
Description: Gorgolewski, Krzysztof, et al. Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python. ''Front Neuroinform''. 2011; '''5''': 13
Updated: Dec 16, 2017
PCCR: Pancreatic Cancer Collaborative Registry.
Description: Sherman, Simon, et al. PCCR: Pancreatic Cancer Collaborative Registry. ''Cancer Inform''. 2011 Mar 23; '''10''': 83-91
Updated: Dec 16, 2017
Distributed computing in image analysis using open source frameworks and application to image sharpness assessment of histological whole slide images.
Description: Zerbe, Norman, et al. Distributed computing in image analysis using open source frameworks and application to image sharpness assessment of histological whole slide images. ''Diagn Pathol''. 2011 Mar 30; '''6 Suppl 1''': S16
Updated: Dec 16, 2017
Assembling global maps of cellular function through integrative analysis of physical and genetic networks.
Description: Srivas, Rohith, et al. Assembling global maps of cellular function through integrative analysis of physical and genetic networks. ''Nat Protoc''. 2011 Aug 11; '''6''' (9):1308-23
Updated: Dec 16, 2017
Open Babel: An open chemical toolbox.
Description: O'Boyle, Noel M, et al. Open Babel: An open chemical toolbox. ''J Cheminform''. 2011 Oct 7; '''3''': 33
Updated: Dec 16, 2017
CML: Evolution and design.
Description: Murray-Rust, Peter, et al. CML: Evolution and design. ''J Cheminform''. 2011 Oct 14; '''3''' (1):44
Updated: Dec 16, 2017
Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk five years on.
Description: O'Boyle, Noel M, et al. Open Data, Open Source and Open Standards in chemistry: The Blue Obelisk five years on. ''J Cheminform''. 2011 Oct 14; '''3''' (1):37
Updated: Dec 16, 2017
OSCAR4: a flexible architecture for chemical text-mining.
Description: Jessop, David M, et al. OSCAR4: a flexible architecture for chemical text-mining. ''J Cheminform''. 2011 Oct 14; '''3''' (1):41
Updated: Dec 16, 2017
The Semantic Automated Discovery and Integration (SADI) Web service Design-Pattern, API and Reference Implementation.
Description: Wilkinson, Mark D, et al. The Semantic Automated Discovery and Integration (SADI) Web service Design-Pattern, API and Reference Implementation. ''J Biomed Semantics''. 2011 Oct 24; '''2''' (1):8
Updated: Dec 16, 2017
International society for disease surveillance conference 2011: building the future of public health surveillance.
Description: Neill, Daniel B, et al. International society for disease surveillance conference 2011: building the future of public health surveillance. ''Emerg Health Threats J''. 2011 Dec 6; '''4''': 11702
Updated: Dec 16, 2017
An online bioinformatics curriculum.
Description: Searls, David B. An online bioinformatics curriculum. ''PLoS Comput Biol''. 2012; '''8''' (9):e1002632
Updated: Dec 16, 2017
Custom software development for use in a clinical laboratory.
Description: Sinard, John H, et al. Custom software development for use in a clinical laboratory. ''J Pathol Inform''. 2012; '''3''': 44
Updated: Dec 16, 2017
ECOMICS: a web-based toolkit for investigating the biomolecular web in ecosystems using a trans-omics approach.
Description: Ogata, Yoshiyuki, et al. ECOMICS: a web-based toolkit for investigating the biomolecular web in ecosystems using a trans-omics approach. ''PLoS One''. 2012; '''7''' (2):e30263
Updated: Dec 16, 2017
Identifying disease mutations in genomic medicine settings: current challenges and how to accelerate progress.
Description: Lyon, Gholson J, et al. Identifying disease mutations in genomic medicine settings: current challenges and how to accelerate progress. ''Genome Med''. 2012; '''4''' (7):58
Updated: Dec 16, 2017
Personalized cloud-based bioinformatics services for research and education: use cases and the elasticHPC package.
Description: El-Kalioby, Mohamed, et al. Personalized cloud-based bioinformatics services for research and education: use cases and the elasticHPC package. ''BMC Bioinformatics''. 2012; '''13 Suppl 17''': S22
Updated: Dec 16, 2017
Retrieval of radiology reports citing critical findings with disease-specific customization.
Description: Lacson, Ronilda, et al. Retrieval of radiology reports citing critical findings with disease-specific customization. ''Open Med Inform J''. 2012; '''6''': 28-35
Updated: Dec 16, 2017
SIMPLEX: cloud-enabled pipeline for the comprehensive analysis of exome sequencing data.
Description: Fischer, Maria, et al. SIMPLEX: cloud-enabled pipeline for the comprehensive analysis of exome sequencing data. ''PLoS One''. 2012; '''7''' (8):e41948
Updated: Dec 16, 2017
The connectome mapper: an open-source processing pipeline to map connectomes with MRI.
Description: Daducci, Alessandro, et al. The connectome mapper: an open-source processing pipeline to map connectomes with MRI. ''PLoS One''. 2012; '''7''' (12):e48121
Updated: Dec 16, 2017
The development of a digitising service centre for natural history collections.
Description: Tegelberg, Riitta, et al. The development of a digitising service centre for natural history collections. ''Zookeys''. 2012; 75-86
Updated: Dec 16, 2017
OMERO: flexible, model-driven data management for experimental biology.
Description: Allan, Chris, et al. OMERO: flexible, model-driven data management for experimental biology. ''Nat Methods''. 2012 Feb 28; '''9''' (3):245-53
Updated: Dec 16, 2017
Bioinformatics tools and database resources for systems genetics analysis in mice--a short review and an evaluation of future needs.
Description: Durrant, Caroline, et al. Bioinformatics tools and database resources for systems genetics analysis in mice--a short review and an evaluation of future needs. ''Brief Bioinform''. 2012 Mar; '''13''' (2):135-42
Updated: Dec 16, 2017
The Stanford Data Miner: a novel approach for integrating and exploring heterogeneous immunological data.
Description: Siebert, Janet C, et al. The Stanford Data Miner: a novel approach for integrating and exploring heterogeneous immunological data. ''J Transl Med''. 2012 Mar 28; '''10''': 62
Updated: Dec 16, 2017
Open semantic annotation of scientific publications using DOMEO.
Description: Ciccarese, Paolo, et al. Open semantic annotation of scientific publications using DOMEO. ''J Biomed Semantics''. 2012 Apr 24; '''3 Suppl 1''': S1
Updated: Dec 16, 2017
Workflows for microarray data processing in the Kepler environment.
Description: Stropp, Thomas, et al. Workflows for microarray data processing in the Kepler environment. ''BMC Bioinformatics''. 2012 May 17; '''13''': 102
Updated: Dec 16, 2017
Getting hired: successfully employed people with disabilities offer advice on disclosure, interviewing, and job search.
Description: Jans, Lita H, et al. Getting hired: successfully employed people with disabilities offer advice on disclosure, interviewing, and job search. ''J Occup Rehabil''. 2012 Jun; '''22''' (2):155-65
Updated: Dec 16, 2017
A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs.
Description: Swain, Martin T, et al. A post-assembly genome-improvement toolkit (PAGIT) to obtain annotated genomes from contigs. ''Nat Protoc''. 2012 Jun 7; '''7''' (7):1260-84
Updated: Dec 16, 2017
BioImageXD: an open, general-purpose and high-throughput image-processing platform.
Description: Kankaanpaa, Pasi, et al. BioImageXD: an open, general-purpose and high-throughput image-processing platform. ''Nat Methods''. 2012 Jun 28; '''9''' (7):683-9
Updated: Dec 16, 2017
Biological imaging software tools.
Description: Eliceiri, Kevin W, et al. Biological imaging software tools. ''Nat Methods''. 2012 Jun 28; '''9''' (7):697-710
Updated: Dec 16, 2017
Current challenges in open-source bioimage informatics.
Description: Cardona, Albert, et al. Current challenges in open-source bioimage informatics. ''Nat Methods''. 2012 Jun 28; '''9''' (7):661-5
Updated: Dec 16, 2017
Fiji: an open-source platform for biological-image analysis.
Description: Schindelin, Johannes, et al. Fiji: an open-source platform for biological-image analysis. ''Nat Methods''. 2012 Jun 28; '''9''' (7):676-82
Updated: Dec 16, 2017
Icy: an open bioimage informatics platform for extended reproducible research.
Description: de Chaumont, Fabrice, et al. Icy: an open bioimage informatics platform for extended reproducible research. ''Nat Methods''. 2012 Jun 28; '''9''' (7):690-6
Updated: Dec 16, 2017
NIH Image to ImageJ: 25 years of image analysis.
Description: Schneider, Caroline A, et al. NIH Image to ImageJ: 25 years of image analysis. ''Nat Methods''. 2012 Jul; '''9''' (7):671-5
Updated: Dec 16, 2017
The Molecule Cloud - compact visualization of large collections of molecules.
Description: Ertl, Peter, et al. The Molecule Cloud - compact visualization of large collections of molecules. ''J Cheminform''. 2012 Jul 6; '''4''' (1):12
Updated: Dec 16, 2017
Proteomic analysis of extracellular matrix from the hepatic stellate cell line LX-2 identifies CYR61 and Wnt-5a as novel constituents of fibrotic liver.
Description: Rashid, S Tamir, et al. Proteomic analysis of extracellular matrix from the hepatic stellate cell line LX-2 identifies CYR61 and Wnt-5a as novel constituents of fibrotic liver. ''J Proteome Res''. 2012 Aug 3; '''11''' (8):4052-64
Updated: Dec 16, 2017
Cross-cultural adaptation, reliability, internal consistency and validation of the Spinal Function Sort (SFS) for French- and German-speaking patients with back complaints.
Description: Borloz, S, et al. Cross-cultural adaptation, reliability, internal consistency and validation of the Spinal Function Sort (SFS) for French- and German-speaking patients with back complaints. ''J Occup Rehabil''. 2012 Sep; '''22''' (3):387-93
Updated: Dec 16, 2017
A repository based on a dynamically extensible data model supporting multidisciplinary research in neuroscience.
Description: Corradi, Luca, et al. A repository based on a dynamically extensible data model supporting multidisciplinary research in neuroscience. ''BMC Med Inform Decis Mak''. 2012 Oct 8; '''12''': 115
Updated: Dec 16, 2017
A microfluidic device and computational platform for high-throughput live imaging of gene expression.
Description: Busch, Wolfgang, et al. A microfluidic device and computational platform for high-throughput live imaging of gene expression. ''Nat Methods''. 2012 Nov; '''9''' (11):1101-6
Updated: Dec 16, 2017
Functional near-infrared spectroscopy for the assessment of overt reading.
Description: Safi, Dima, et al. Functional near-infrared spectroscopy for the assessment of overt reading. ''Brain Behav''. 2012 Nov; '''2''' (6):825-37
Updated: Dec 16, 2017
Physico-chemical variables determining the invasion risk of freshwater habitats by alien mollusks and crustaceans.
Description: Fruh, Denise, et al. Physico-chemical variables determining the invasion risk of freshwater habitats by alien mollusks and crustaceans. ''Ecol Evol''. 2012 Nov; '''2''' (11):2843-53
Updated: Dec 16, 2017
Workers who stay at work despite chronic nonspecific musculoskeletal pain: do they differ from workers with sick leave?
Description: de Vries, Haitze J, et al. Workers who stay at work despite chronic nonspecific musculoskeletal pain: do they differ from workers with sick leave? ''J Occup Rehabil''. 2012 Dec; '''22''' (4):489-502
Updated: Dec 16, 2017
Chromatin is an ancient innovation conserved between Archaea and Eukarya.
Description: Ammar, Ron, et al. Chromatin is an ancient innovation conserved between Archaea and Eukarya. ''Elife''. 2012 Dec 13; '''1''': e00078
Updated: Dec 16, 2017
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Streaming support for data intensive cloud-based sequence analysis.
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The Design of SimpleITK.
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The Papillomavirus Episteme: a central resource for papillomavirus sequence data and analysis.
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Computing: A vision for data science.
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The UCSC genome browser and associated tools.
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The Enzyme Portal: a case study in applying user-centred design methods in bioinformatics.
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Light microscopy applications in systems biology: opportunities and challenges.
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Automated Patent Categorization and Guided Patent Search using IPC as Inspired by MeSH and PubMed.
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Phylotastic! Making tree-of-life knowledge accessible, reusable and convenient.
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A comparative phenotypic and genomic analysis of C57BL/6J and C57BL/6N mouse strains.
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FijiWings: an open source toolkit for semiautomated morphometric analysis of insect wings.
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3D brain atlas reconstructor service--online repository of three-dimensional models of brain structures.
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FieldML, a proposed open standard for the Physiome project for mathematical model representation.
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Molecule database framework: a framework for creating database applications with chemical structure search capability.
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Computing: Out of the hood.
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A comparison of supervised machine learning algorithms and feature vectors for MS lesion segmentation using multimodal structural MRI.
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Anima: modular workflow system for comprehensive image data analysis.
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Collaborative mining and interpretation of large-scale data for biomedical research insights.
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Controlled vocabularies and ontologies in proteomics: overview, principles and practice.
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CottonGen: a genomics, genetics and breeding database for cotton research.
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Dipy, a library for the analysis of diffusion MRI data.
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DTIPrep: quality control of diffusion-weighted images.
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Enriched biodiversity data as a resource and service.
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How do astronomers share data? Reliability and persistence of datasets linked in AAS publications and a qualitative study of data practices among US astronomers.
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Informatic system for a global tissue-fluid biorepository with a graph theory-oriented graphical user interface.
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OntoTrader: an ontological Web trading agent approach for environmental information retrieval.
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Presentation accuracy of the web revisited: animation methods in the HTML5 era.
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SoyFN: a knowledge database of soybean functional networks.
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Statistical normalization techniques for magnetic resonance imaging.
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Web based tools for visualizing imaging data and development of XNATView, a zero footprint image viewer.
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High-density lipoprotein mediates anti-inflammatory reprogramming of macrophages via the transcriptional regulator ATF3.
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Segmentation and quantification of subcellular structures in fluorescence microscopy images using Squassh.
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State rehabilitation services tailored to employment status among cancer survivors.
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The effect of different chemical surface treatments of denture teeth on shear bond strength: a comparative study.
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Enhancing UCSF Chimera through web services.
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The BiSciCol Triplifier: bringing biodiversity data to the Semantic Web.
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Quantitative analysis of triple-mutant genetic interactions.
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ACTRIMS-ECTRIMS MSBoston 2014: Poster Sessions 2.
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Cross-cultural adaptation, reliability, internal consistency and validation of the Hand Function Sort (HFS(c)) for French speaking patients with upper limb complaints.
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Measurement Properties of the Spinal Function Sort in Patients with Sub-acute Whiplash-Associated Disorders.
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