The links below are to publications on PubMed referring to JIST: Java Image Science Toolkit. This list is gathered weekly from PubMed automatically.

Publication/References
Multi-parametric neuroimaging reproducibility: a 3-T resource study.
Description: Landman, Bennett A, et al. Multi-parametric neuroimaging reproducibility: a 3-T resource study. ''Neuroimage''. 2011 Feb 14; '''54''' (4):2854-66
Population-wide principal component-based quantification of blood-brain-barrier dynamics in multiple sclerosis.
Description: Shinohara, Russell T, et al. Population-wide principal component-based quantification of blood-brain-barrier dynamics in multiple sclerosis. ''Neuroimage''. 2011 Aug 15; '''57''' (4):1430-46
Resolution of crossing fibers with constrained compressed sensing using diffusion tensor MRI.
Description: Landman, Bennett A, et al. Resolution of crossing fibers with constrained compressed sensing using diffusion tensor MRI. ''Neuroimage''. 2012 Feb 1; '''59''' (3):2175-86
Quantitative prediction of 3D solution shape and flexibility of nucleic acid nanostructures.
Description: Kim, Do-Nyun, et al. Quantitative prediction of 3D solution shape and flexibility of nucleic acid nanostructures. ''Nucleic Acids Res''. 2012 Apr; '''40''' (7):2862-8
A hitchhiker's guide to diffusion tensor imaging.
Description: Soares, Jose M, et al. A hitchhiker's guide to diffusion tensor imaging. ''Front Neurosci''. 2013; '''7''': 31
Automatic magnetic resonance spinal cord segmentation with topology constraints for variable fields of view.
Description: Chen, Min, et al. Automatic magnetic resonance spinal cord segmentation with topology constraints for variable fields of view. ''Neuroimage''. 2013 Dec; '''83''': 1051-62
Resource estimation in high performance medical image computing.
Description: Banalagay, Rueben, et al. Resource estimation in high performance medical image computing. ''Neuroinformatics''. 2014 Oct; '''12''' (4):563-73
Assessing intracortical myelin in the living human brain using myelinated cortical thickness.
Description: Rowley, Christopher D, et al. Assessing intracortical myelin in the living human brain using myelinated cortical thickness. ''Front Neurosci''. 2015; '''9''': 396
Patterns of myeloarchitecture in lower limb amputees: an MRI study.
Description: Hashim, Eyesha, et al. Patterns of myeloarchitecture in lower limb amputees: an MRI study. ''Front Neurosci''. 2015; '''9''': 15
Segmentation of the Cerebellar Peduncles Using a Random Forest Classifier and a Multi-object Geometric Deformable Model: Application to Spinocerebellar Ataxia Type 6.
Description: Ye, Chuyang, et al. Segmentation of the Cerebellar Peduncles Using a Random Forest Classifier and a Multi-object Geometric Deformable Model: Application to Spinocerebellar Ataxia Type 6. ''Neuroinformatics''. 2015 Jul; '''13''' (3):367-81
PREVAIL: Predicting Recovery through Estimation and Visualization of Active and Incident Lesions.
Description: Dworkin, Jordan D, et al. PREVAIL: Predicting Recovery through Estimation and Visualization of Active and Incident Lesions. ''Neuroimage Clin''. 2016; '''12''': 293-9
Relating multi-sequence longitudinal intensity profiles and clinical covariates in incident multiple sclerosis lesions.
Description: Sweeney, Elizabeth M, et al. Relating multi-sequence longitudinal intensity profiles and clinical covariates in incident multiple sclerosis lesions. ''Neuroimage Clin''. 2016; '''10''': 1-17
Topology of genetic associations between regional gray matter volume and intellectual ability: Evidence for a high capacity network.
Description: Bohlken, Marc M, et al. Topology of genetic associations between regional gray matter volume and intellectual ability: Evidence for a high capacity network. ''Neuroimage''. 2016 Jan 1; '''124''' (Pt A):1044-1053
Consistent cortical reconstruction and multi-atlas brain segmentation.
Description: Huo, Yuankai, et al. Consistent cortical reconstruction and multi-atlas brain segmentation. ''Neuroimage''. 2016 Sep; '''138''': 197-210
Simultaneous total intracranial volume and posterior fossa volume estimation using multi-atlas label fusion.
Description: Huo, Yuankai, et al. Simultaneous total intracranial volume and posterior fossa volume estimation using multi-atlas label fusion. ''Hum Brain Mapp''. 2017 Feb; '''38''' (2):599-616
A Metabolic Function for Phospholipid and Histone Methylation.
Description: Ye, Cunqi, et al. A Metabolic Function for Phospholipid and Histone Methylation. ''Mol Cell''. 2017 Apr 20; '''66''' (2):180-193.e8
Age-related mapping of intracortical myelin from late adolescence to middle adulthood using T1 -weighted MRI.
Description: Rowley, Christopher D, et al. Age-related mapping of intracortical myelin from late adolescence to middle adulthood using T1 -weighted MRI. ''Hum Brain Mapp''. 2017 Jul; '''38''' (7):3691-3703
FLAIR* to visualize veins in white matter lesions: A new tool for the diagnosis of multiple sclerosis?
Description: Campion, T, et al. FLAIR* to visualize veins in white matter lesions: A new tool for the diagnosis of multiple sclerosis? ''Eur Radiol''. 2017 Oct; '''27''' (10):4257-4263
Altered Intracortical T1-Weighted/T2-Weighted Ratio Signal in Huntington's Disease.
Description: Rowley, Christopher D, et al. Altered Intracortical T1-Weighted/T2-Weighted Ratio Signal in Huntington's Disease. ''Front Neurosci''. 2018; '''12''': 805
Resolving multisensory and attentional influences across cortical depth in sensory cortices.
Description: Gau, Remi, et al. Resolving multisensory and attentional influences across cortical depth in sensory cortices. ''Elife''. 2020 Jan 8; '''9''':