open-discussion > Help with failed Split_Crop
Showing 1-3 of 3 posts
May 6, 2016 03:05 AM | Sheng-Che Hung - Taipei Veterans General Hospital
Help with failed Split_Crop
Hi,
I am a beginner of PANDA.
I encountered the following message during processing DTI.
Could someone help me?
Besides, could PANDA support TOPUP function of FSL?
Thanks a lot!
Alex
-----
***************************************************************************
JobName: Split_Crop_00001
Status: failed
***************************************************************************
******************************
Log of the (matlab) job : Split_Crop_00001
Started on 05-May-2016 22:59:29
User: schung
host : Home: Undefined variable.
Sheng-ChedeMac-mini.local
system : unix
******************************
The job starts now !
********************
Home: Undefined variable.
********************
Something went bad ... the job has FAILED !
The last error message occured was :
Error using save
Variable 'VolumeCropped_fileName' not found.
File /Users/schung/matlab/PANDA_1.3.0_64/g_NIIcrop.m at line 133
File /Users/schung/matlab/PANDA_1.3.0_64/psom-1.0.4/psom_run_job.m at line 252
File /Users/schung/matlab/PANDA_1.3.0_64/psom-1.0.4/psom_run_job.m at line 166
****************
Checking outputs
****************
The output file or directory /Users/schung/analysis/disconnection_4DTI/Results/00001/tmp/00001_DWI_01_0000_crop.nii.gz has not been generated!
The output file or directory /Users/schung/analysis/disconnection_4DTI/Results/00001/native_space/data_b0_average_crop.nii.gz has not been generated!
The output file or directory /Users/schung/analysis/disconnection_4DTI/Results/00001/tmp/OutputDone/Split_Crop_00001.done has not been generated!
The output file or directory /Users/schung/analysis/disconnection_4DTI/Results/00001/tmp/NIIcrop_output.mat has not been generated!
***********************************************
05-May-2016 23:00:31 : The job has FAILED
Total time used to process the job : 61.76 sec.
***********************************************
ans =
1
I am a beginner of PANDA.
I encountered the following message during processing DTI.
Could someone help me?
Besides, could PANDA support TOPUP function of FSL?
Thanks a lot!
Alex
-----
***************************************************************************
JobName: Split_Crop_00001
Status: failed
***************************************************************************
******************************
Log of the (matlab) job : Split_Crop_00001
Started on 05-May-2016 22:59:29
User: schung
host : Home: Undefined variable.
Sheng-ChedeMac-mini.local
system : unix
******************************
The job starts now !
********************
Home: Undefined variable.
********************
Something went bad ... the job has FAILED !
The last error message occured was :
Error using save
Variable 'VolumeCropped_fileName' not found.
File /Users/schung/matlab/PANDA_1.3.0_64/g_NIIcrop.m at line 133
File /Users/schung/matlab/PANDA_1.3.0_64/psom-1.0.4/psom_run_job.m at line 252
File /Users/schung/matlab/PANDA_1.3.0_64/psom-1.0.4/psom_run_job.m at line 166
****************
Checking outputs
****************
The output file or directory /Users/schung/analysis/disconnection_4DTI/Results/00001/tmp/00001_DWI_01_0000_crop.nii.gz has not been generated!
The output file or directory /Users/schung/analysis/disconnection_4DTI/Results/00001/native_space/data_b0_average_crop.nii.gz has not been generated!
The output file or directory /Users/schung/analysis/disconnection_4DTI/Results/00001/tmp/OutputDone/Split_Crop_00001.done has not been generated!
The output file or directory /Users/schung/analysis/disconnection_4DTI/Results/00001/tmp/NIIcrop_output.mat has not been generated!
***********************************************
05-May-2016 23:00:31 : The job has FAILED
Total time used to process the job : 61.76 sec.
***********************************************
ans =
1
May 7, 2016 02:05 AM | Zaixu Cui
RE: Help with failed Split_Crop
Hi,
Do you use QQ.
My QQ number is 575967039。
My email is zaixucui@gmail.com.
I am trying to solve this problem these days and plan for a new version.
Please contact me, I will give you a new version.
Best
Zaixu
Do you use QQ.
My QQ number is 575967039。
My email is zaixucui@gmail.com.
I am trying to solve this problem these days and plan for a new version.
Please contact me, I will give you a new version.
Best
Zaixu
Jul 22, 2016 01:07 PM | Zaixu Cui
RE: Help with failed Split_Crop
Hi,
The new version PANDA 1.3.1 has solved this problem thoroughly.
Please try this version.
Best wishes
Zaixu
The new version PANDA 1.3.1 has solved this problem thoroughly.
Please try this version.
Best wishes
Zaixu
