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help > confound corrected nifti header shows TR 1
Nov 16, 2015 07:11 AM | Rajeev Krishnadas
confound corrected nifti header shows TR 1
Hi guys,
I would really appreciate some insight into this please.
I was going to run an ICA using MELODIC on the "confound corrected nii files" from the results/preprocessing folder.
e.g. "niftiDATA_Subject001_Condition000"
fslinfo shows that the header information on the nii files contains TR as 1.
fslinfo output
data_type FLOAT32
dim1 91
dim2 109
dim3 91
dim4 300
datatype 16
pixdim1 2.000000
pixdim2 2.000000
pixdim3 2.000000
pixdim4 1.000000
cal_max 0.0000
cal_min 0.0000
file_type NIFTI-1+
My original TR was 2?
Why has this changed?
Do I need to change it back before I run the ICA?
Any suggestions would be most helpful.
Cheers
Rajeev
I would really appreciate some insight into this please.
I was going to run an ICA using MELODIC on the "confound corrected nii files" from the results/preprocessing folder.
e.g. "niftiDATA_Subject001_Condition000"
fslinfo shows that the header information on the nii files contains TR as 1.
fslinfo output
data_type FLOAT32
dim1 91
dim2 109
dim3 91
dim4 300
datatype 16
pixdim1 2.000000
pixdim2 2.000000
pixdim3 2.000000
pixdim4 1.000000
cal_max 0.0000
cal_min 0.0000
file_type NIFTI-1+
My original TR was 2?
Why has this changed?
Do I need to change it back before I run the ICA?
Any suggestions would be most helpful.
Cheers
Rajeev
Threaded View
| Title | Author | Date |
|---|---|---|
| Rajeev Krishnadas | Nov 16, 2015 | |
| Rajeev Krishnadas | Nov 17, 2015 | |
| Patricia M | Sep 22, 2016 | |
| Rajeev Krishnadas | Oct 8, 2016 | |
| Pravesh Parekh | Sep 23, 2016 | |
