open-discussion > RE: slice timing information
Dec 16, 2009  03:12 AM | Daniel Glen
RE: slice timing information
Thanks for the information. We're anxious to get started looking at this data. I've looked through the header information using nifti_tool, and I still can not find the slice timing information. I've used this command to look at all the datasets:

nifti_tool -disp_hdr -infile_spec rest_sub*.nii.gz | grep slice_code

The slice_code field would require slice_duration to be set too, but that is set to 0.0. If you have the timing by site (alt+z, for instance), we could use that. There is some more info about slice timing information in NIFTI files at these links:

http://nifti.nimh.nih.gov/nifti-1/docume... (see FAQ 20)

http://nifti.nimh.nih.gov/nifti-1/docume...


Threaded View

TitleAuthorDate
Daniel Glen Dec 14, 2009
Maarten Mennes Dec 15, 2009
RE: slice timing information
Daniel Glen Dec 16, 2009
Xi-Nian Zuo Dec 16, 2009
Daniel Glen Dec 16, 2009
Lisa Kilpatrick Jan 26, 2010
Michael Milham Feb 1, 2010
Yunxia Tong Feb 2, 2010
Michel Grothe Feb 4, 2010
Maarten Mennes Feb 6, 2010
Michael Milham Feb 9, 2010
Sheng Zhang Mar 17, 2010
Maarten Mennes Mar 24, 2010
Alok Deshpande Jul 30, 2010
Michael Milham Aug 3, 2010
Alok Deshpande Aug 13, 2010
Michael Milham Feb 3, 2010
Michael Milham Jan 28, 2010
Michael Milham Dec 17, 2009
Daniel Glen Dec 17, 2009