open-discussion
open-discussion > RE: slice timing information
Dec 16, 2009 03:12 AM | Daniel Glen
RE: slice timing information
Thanks for the information. We're anxious to get started looking at
this data. I've looked through the header information using
nifti_tool, and I still can not find the slice timing information.
I've used this command to look at all the datasets:
nifti_tool -disp_hdr -infile_spec rest_sub*.nii.gz | grep slice_code
The slice_code field would require slice_duration to be set too, but that is set to 0.0. If you have the timing by site (alt+z, for instance), we could use that. There is some more info about slice timing information in NIFTI files at these links:
http://nifti.nimh.nih.gov/nifti-1/docume... (see FAQ 20)
http://nifti.nimh.nih.gov/nifti-1/docume...
nifti_tool -disp_hdr -infile_spec rest_sub*.nii.gz | grep slice_code
The slice_code field would require slice_duration to be set too, but that is set to 0.0. If you have the timing by site (alt+z, for instance), we could use that. There is some more info about slice timing information in NIFTI files at these links:
http://nifti.nimh.nih.gov/nifti-1/docume... (see FAQ 20)
http://nifti.nimh.nih.gov/nifti-1/docume...
Threaded View
| Title | Author | Date |
|---|---|---|
| Daniel Glen | Dec 14, 2009 | |
| Maarten Mennes | Dec 15, 2009 | |
| Daniel Glen | Dec 16, 2009 | |
| Xi-Nian Zuo | Dec 16, 2009 | |
| Daniel Glen | Dec 16, 2009 | |
| Lisa Kilpatrick | Jan 26, 2010 | |
| Michael Milham | Feb 1, 2010 | |
| Yunxia Tong | Feb 2, 2010 | |
| Michel Grothe | Feb 4, 2010 | |
| Maarten Mennes | Feb 6, 2010 | |
| Michael Milham | Feb 9, 2010 | |
| Sheng Zhang | Mar 17, 2010 | |
| Maarten Mennes | Mar 24, 2010 | |
| Alok Deshpande | Jul 30, 2010 | |
| Michael Milham | Aug 3, 2010 | |
| Alok Deshpande | Aug 13, 2010 | |
| Michael Milham | Feb 3, 2010 | |
| Michael Milham | Jan 28, 2010 | |
| Michael Milham | Dec 17, 2009 | |
| Daniel Glen | Dec 17, 2009 | |
