help > Problem representing pial surfaces and aseg ROIS from FreeSurfer
Oct 31, 2018  09:10 AM | Alexis Moscoso
Problem representing pial surfaces and aseg ROIS from FreeSurfer
Dear Mingrui,

I’ve been trying to plot simultaneously a surface (lh.pial and rh.pial from FreeSurfer after merging them with the BrainNet tool) and a volume (the aparc+aseg VOI map, converted to a .nii file with mri_convert from FreeSurfer). Although I got no errors in the process, the pial surface and the VOIS are clearly misaligned, and the VOI map lies far away from the surface.

I read in a similar help topic that you recommended to comment a couple of lines in the BrainNet.m file to solve this problem. However, in the version I got, these lines are already commented and still have the same issue. Any help would be highly appreciated.

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TitleAuthorDate
Problem representing pial surfaces and aseg ROIS from FreeSurfer
Alexis Moscoso Oct 31, 2018
Mingrui Xia Oct 31, 2018
Alexis Moscoso Nov 2, 2018
Mingrui Xia Nov 4, 2018
Alexis Moscoso Nov 9, 2018