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help > RE: Atlas.nii ROI's
Jan 16, 2019 02:01 AM | Hyunwoo Kim
RE: Atlas.nii ROI's
There are some information in the directory where you
install(unzip) conn.
In my case,
~/conn/rois/ is my conn installation directory.
If you look at this directory, you may see several files such as text, images and NIFTi files regarding atlas and networks which CONN uses.
For example, if you open 'atlas.info' file you can see the rules that CONN used to define ROI.
(Because I'm using linux, 'cat' command works, but I don't know in MAC...)
As written in this file, CONN uses the Harvard-Oxford Atlas for both cortical and subcortical atlas.
For more information, you have to read 'atlas.info' file because there are reference paper.
That paper would give more information I think.
Good luck for your research!
In my case,
~/conn/rois/ is my conn installation directory.
If you look at this directory, you may see several files such as text, images and NIFTi files regarding atlas and networks which CONN uses.
For example, if you open 'atlas.info' file you can see the rules that CONN used to define ROI.
(Because I'm using linux, 'cat' command works, but I don't know in MAC...)
As written in this file, CONN uses the Harvard-Oxford Atlas for both cortical and subcortical atlas.
For more information, you have to read 'atlas.info' file because there are reference paper.
That paper would give more information I think.
Good luck for your research!
Threaded View
| Title | Author | Date |
|---|---|---|
| Greg Overbeek | Feb 14, 2018 | |
| Megan Fitzhugh | Jan 15, 2019 | |
| Hyunwoo Kim | Jan 16, 2019 | |
| Pravesh Parekh | Jan 16, 2019 | |
| Alfonso Nieto-Castanon | Jan 17, 2019 | |
