users > RE: Registration failed to execute: No such file or directory
Oct 31, 2019  11:10 AM | Greg Jefferis
RE: Registration failed to execute: No such file or directory
Hi Sarah,

First of all, what platform are you on? 

For the missing files, I suggest you do the following.

Go to your terminal command line application (Cygwin?)
cd /home/sarah/yourregistrationfolder
ls /home/sarah/Fiji.app/bin/cmtk/bin/registration
ls refbrain/Ref20131120pt14pl2.nrrd
ls images/21OctSP8Fish1_01.nrrd

to see if we can figure out which file is missing.

Re this question:
I also have one additional question: I have 2 channels, one for tERK and one for pERK. Does it matter which one is 01 and which one is 02?

It is a bit easier if the reference channel for registration is channel 01. If your reference channel is channel 02, you need add an extra command line option to inform the tools about this.

All the best,

Greg.

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TitleAuthorDate
lewe Oct 31, 2019
RE: Registration failed to execute: No such file or directory
Greg Jefferis Oct 31, 2019
lewe Nov 1, 2019
Greg Jefferis Nov 1, 2019
lewe Nov 1, 2019
Greg Jefferis Nov 1, 2019
caroline kibat Feb 4, 2020
Greg Jefferis Feb 4, 2020