users > RE: Registration failed to execute: No such file or directory
Nov 1, 2019  02:11 AM | lewe
RE: Registration failed to execute: No such file or directory
Hi Greg,

Thank you for your fast response. I am using Manjaro in a virtual box...

As you suggested I checked which files are missing:

ls refbrain/Ref20131120pt14pl2.nrrd I can find the refbrain

ls images/21OctSP8Fish1_01.nrrd I can find all the images

ls /home/sarah/Fiji.app/bin/cmtk/bin/registration I cannot find registration in the cmtk bin.


Maybe I mixed up the folder structure when I installed CMTK (not with Fiji). The folder structure currently looks like this:

/home/sarah/Fiji.app/bin/cmtk/

In the cmtk folder are four subfolders (bin, include, lib and share)

/home/sarah/Fiji.app/bin/cmtk/bin/ includes the cmtk and munger script.

There is a folder which is called Registration, however, it is not in the bin..it is included in the following folders

/home/sarah/Fiji.app/bin/cmtk/include/cmtk/Registration

Is this the folder I was looking for with ls /home/sarah/Fiji.app/bin/cmtk/bin/registration ? Do I need to move it somewhere else?

Cheers,
Sarah

Threaded View

TitleAuthorDate
lewe Oct 31, 2019
Greg Jefferis Oct 31, 2019
RE: Registration failed to execute: No such file or directory
lewe Nov 1, 2019
Greg Jefferis Nov 1, 2019
lewe Nov 1, 2019
Greg Jefferis Nov 1, 2019
caroline kibat Feb 4, 2020
Greg Jefferis Feb 4, 2020