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users > RE: Registration failed to execute: No such file or directory
Jun 2, 2020 05:06 PM | isabeldal
RE: Registration failed to execute: No such file or directory
Hello,
Sorry to add to the confusion, but Im currently encountering a similar issue when trying to use the CMTK Registration GUI within Fiji on Ubuntu. I installed the CMTK GUI using the update site and used Plugins>CMTK Registration > Install CMTK to install CMTK. This successfully generates a Fiji.app/bin/cmtk directory containing several files . However, within this directory, there is no bin directory ( I gather from this thread that there should be a bin/registration directory).
When I try to run the registration from the CMTK Gui, I get an error message that indicates there may be files missing from my CMTK directory:
Root directory is/home/isabel/Desktop/Registration
Aff:20190115_R26B07_MCFO_slide48_nc82 /home/isabel/Downlaods/Fiji.app/bin/cmtk/registration: error while loading shared libraries: libdcmdata.so.4: cannot open shared object file: No such file or directory
MYEXEC: CMD = /home/isabel/Downloads/Fiji.app/bin/cmtk/registration -i -v --dofs 6 --dofs 9 --accuracy 0.4 -o Registration/affine/JFRC2010_20190115_R26B07_MCFO_slide48_nc82_9dof.list reference/JFRC2010_Mask.nrrd images 20190115_R26B07_MCFO_slide48_nc82.nrrd exited with value 127
Has anyone encountered this issue or know how to go about fixing this problem?
Thanks!
Isabel
Sorry to add to the confusion, but Im currently encountering a similar issue when trying to use the CMTK Registration GUI within Fiji on Ubuntu. I installed the CMTK GUI using the update site and used Plugins>CMTK Registration > Install CMTK to install CMTK. This successfully generates a Fiji.app/bin/cmtk directory containing several files . However, within this directory, there is no bin directory ( I gather from this thread that there should be a bin/registration directory).
When I try to run the registration from the CMTK Gui, I get an error message that indicates there may be files missing from my CMTK directory:
Root directory is/home/isabel/Desktop/Registration
Aff:20190115_R26B07_MCFO_slide48_nc82 /home/isabel/Downlaods/Fiji.app/bin/cmtk/registration: error while loading shared libraries: libdcmdata.so.4: cannot open shared object file: No such file or directory
MYEXEC: CMD = /home/isabel/Downloads/Fiji.app/bin/cmtk/registration -i -v --dofs 6 --dofs 9 --accuracy 0.4 -o Registration/affine/JFRC2010_20190115_R26B07_MCFO_slide48_nc82_9dof.list reference/JFRC2010_Mask.nrrd images 20190115_R26B07_MCFO_slide48_nc82.nrrd exited with value 127
Has anyone encountered this issue or know how to go about fixing this problem?
Thanks!
Isabel
Threaded View
Title | Author | Date |
---|---|---|
lewe | Oct 31, 2019 | |
isabeldal | Jun 2, 2020 | |
Greg Jefferis | Jun 2, 2020 | |
Greg Jefferis | Jun 3, 2020 | |
Greg Jefferis | Oct 31, 2019 | |
lewe | Nov 1, 2019 | |
Greg Jefferis | Nov 1, 2019 | |
lewe | Nov 1, 2019 | |
Greg Jefferis | Nov 2, 2019 | |
caroline kibat | Feb 5, 2020 | |
Greg Jefferis | Feb 5, 2020 | |