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help > RE: New CONN update and the matrix in the ROI to ROI \How to visualise the matrix with ROI names
Jun 23, 2020 03:06 PM | Shady El Damaty - Georgetown University
RE: New CONN update and the matrix in the ROI to ROI \How to visualise the matrix with ROI names
Hi,
I've given this a try and it does not work. I've downloaded + decompressed the supplied file and copied it's contents into the CONN folder within the MATLAB path. The results explorer changes but there is no "Matrix Display." There is a GLM display button only. I am using CONNv19c in matlab 2020a. Screenshot attached
Originally posted by Alfonso Nieto-Castanon:
I've given this a try and it does not work. I've downloaded + decompressed the supplied file and copied it's contents into the CONN folder within the MATLAB path. The results explorer changes but there is no "Matrix Display." There is a GLM display button only. I am using CONNv19c in matlab 2020a. Screenshot attached
Originally posted by Alfonso Nieto-Castanon:
Hi Aser,
In the attached patch I have added a new 'matrix display' button to the ROI-to-ROI results explorer window that will give you a bit more flexibility and options for displaying your results in terms of ROI-to-ROI connectivity matrices (this patch is for release 19c, to install it first unzip the attached file and then copy all of the resulting files to your conn distribution folder overwriting the files with the same name there)
Let me know if that works ok and/or any comments/suggestions for improvement
Best
Alfonso
Originally posted by Aser A:
In the attached patch I have added a new 'matrix display' button to the ROI-to-ROI results explorer window that will give you a bit more flexibility and options for displaying your results in terms of ROI-to-ROI connectivity matrices (this patch is for release 19c, to install it first unzip the attached file and then copy all of the resulting files to your conn distribution folder overwriting the files with the same name there)
Let me know if that works ok and/or any comments/suggestions for improvement
Best
Alfonso
Originally posted by Aser A:
Hi all
So for the new CONN update in the second level ROI 2 ROI analysis. You can explore the results. When way of showing the result is display the connectivity using a matrix instead of the connected lines.. This is so great in terms of viewing the results.
However I have this problem: I cannot figure out the relation between the regions of the locations and the names of the regions inside the matrix.
CONN does not name the x and y of the matrix and each line by the region name.
So how can I display the region names to be meaningful and make the matrix easy to read?
Thanks
I posted this before but could not find an answer to it.
So for the new CONN update in the second level ROI 2 ROI analysis. You can explore the results. When way of showing the result is display the connectivity using a matrix instead of the connected lines.. This is so great in terms of viewing the results.
However I have this problem: I cannot figure out the relation between the regions of the locations and the names of the regions inside the matrix.
CONN does not name the x and y of the matrix and each line by the region name.
So how can I display the region names to be meaningful and make the matrix easy to read?
Thanks
I posted this before but could not find an answer to it.
Threaded View
| Title | Author | Date |
|---|---|---|
| Aser A | Jun 20, 2020 | |
| Alfonso Nieto-Castanon | Jun 22, 2020 | |
| Shady El Damaty | Jun 23, 2020 | |
| Shady El Damaty | Jun 23, 2020 | |