help > RE: Using surfaces produced by CAT12 as anatomicals
Dec 18, 2020  06:12 PM | Alfonso Nieto-Castanon - Boston University
RE: Using surfaces produced by CAT12 as anatomicals
Hi Paul,

I have not tried this yet but my impression is that CAT12 files follow freesurfer convention very closely so it should be just a matter of converting the associated .gii files (e.g. lh|rh.pial.gii) to freesurfer/mgh format (e.g. lh|rh.pial). If you could please share a zip file with the outputs of CAT12 for a single subject/anatomical (particularly the "mri" and "surf" folders) I will be happy to take a look and see if I can offer a simple pathway to import CAT12 files into CONN

Best
Alfonso
Originally posted by Paul Dhami:
Greetings,

I would like to use the surfaces as produced by CAT12 for the anatomical/structural files inputs int CONN. However, CAT12 produces a .gii file for each hemisphere.

Can anyone please suggest as to how I can use the outputs of CAT12 as inputs into CONN?

Thank you.
Paul
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TitleAuthorDate
Paul Dhami Dec 15, 2020
Paul Dhami Dec 18, 2020
Alfonso Nieto-Castanon Dec 19, 2020
Paul Dhami Dec 22, 2020
RE: Using surfaces produced by CAT12 as anatomicals
 Alfonso Nieto-Castanon Dec 18, 2020
Benxamin varela Dec 16, 2020